RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RPL35AP18077 110 aaKnown RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 NDST2P52849 883 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 ERVK-16P61578 105 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 GOLGA8DPQ0D2H9 430 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 CDH18Q13634 790 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 EIF4A2Q14240 407 aaKnown RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 MELKQ14680 651 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 NR1D2Q14995 579 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 HERC3Q15034 1050 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 BRD3Q15059 726 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 SLC35D3Q5M8T2 416 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 UGT3A1Q6NUS8 523 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 ZNF530Q6P9A1 599 aaPredicted RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 CATSPER3Q86XQ3 398 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 ARID3BQ8IVW6 561 aaPredicted RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 RTL3Q8N8U3 475 aaKnown RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 SSC4DQ8WTU2 575 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 TRIM63Q969Q1 353 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 DDOQ99489 341 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 APOL2Q9BQE5 337 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 URM1Q9BTM9 101 aaKnown RBP1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 S1PR5Q9H228 398 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 IL17BQ9UHF5 180 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 GRIP1Q9Y3R0 1128 aa1.37□□□□□ -2.19
RNU6-238P-201ENST00000363313 ENO4A6NNW6 628 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 NPIPB9F8W1W9 429 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 H3BQ06 376 aaPredicted RBP1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 O00370 1275 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 LATO43561 262 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 SSX4O60224 188 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 FOXH1O75593 365 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 PRDM1O75626 825 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 ALOX5P09917 674 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 FAM200BP0CF97 657 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 GP1BBP13224 206 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 GIFP27352 417 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 NMBRP28336 390 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 FKBP3Q00688 224 aaKnown RBP1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 DMPKQ09013 629 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 ODF4Q2M2E3 257 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 ARMC8Q8IUR7 673 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 HVCN1Q96D96 273 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 ERLEC1Q96DZ1 483 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 OR6C1Q96RD1 312 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 RAD9AQ99638 391 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 PIP5K1AQ99755 562 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 LMF2Q9BU23 707 aaKnown RBP1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 NYXQ9GZU5 481 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 MTMR6Q9Y217 621 aa1.36□□□□□ -2.19
RNU6-238P-201ENST00000363313 RALGAPA1Q6GYQ0 2036 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 SPRR5A0A1B0GTR4 108 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 IQCMA0A1B0GVH7 501 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 HYKKA2RU49 373 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 E9PAM4 449 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 K7ENM7 598 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 SLC33A1O00400 549 aaPredicted RBP1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 HOXC11O43248 304 aaPredicted RBP1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 GJB3O75712 270 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 RENP00797 406 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 ZNF853P0CG23 659 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 UBL4AP11441 157 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 ZNF17P17021 662 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 CDH2P19022 906 aaPredicted RBP1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 CDH3P22223 829 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 DHODHQ02127 395 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 SGCGQ13326 291 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 WSCD1Q658N2 575 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 IGFL2Q6UWQ7 119 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 IQCHQ86VS3 1027 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 HJURPQ8NCD3 748 aaPredicted RBP1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 HTRA1Q92743 480 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 ESAMQ96AP7 390 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 NUS1Q96E22 293 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 SLC39A13Q96H72 371 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 OR2A14Q96R47 310 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 NCAPGQ9BPX3 1015 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 PCDHB16Q9NRJ7 776 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 SELENOKQ9Y6D0 94 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 ZNF541Q9H0D2 1346 aa1.35□□□□□ -2.19
RNU6-238P-201ENST00000363313 IGHV3-38A0A0C4DH36 116 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 E7ENQ6 273 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 TGFB1I1O43294 461 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 BAIAP3O94812 1187 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 LMO2P25791 158 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 ABCD3P28288 659 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 CSTF2P33240 577 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 BSGP35613 385 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 KHKP50053 298 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 GALCP54803 685 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 SHHQ15465 462 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 FAM189A2Q15884 450 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 INTS11Q5TA45 600 aaKnown RBP1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 JADE1Q6IE81 842 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 PAMR1Q6UXH9 720 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 FAM89BQ8N5H3 189 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 NPEPL1Q8NDH3 523 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 OR4D10Q8NGI6 311 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 CHURC1Q8WUH1 139 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 HNRNPABQ99729 332 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms