RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ACLYP53396 1101 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 PRSS36Q5K4E3 855 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 ADNP2Q6IQ32 1131 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 CXorf57Q6NSI4 855 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 EID3Q8N140 333 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 Q8N9G6 341 aaPredicted RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 HTRA1Q92743 480 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 FATE1Q969F0 183 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 RBM4BQ9BQ04 359 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 RBM4Q9BWF3 364 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 PRM3Q9NNZ6 103 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 NUDT4Q9NZJ9 180 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 INTS6Q9UL03 887 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 S100BP04271 92 aaPredicted RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 NUDT7P0C024 238 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 RCVRNP35243 200 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 VLDLRP98155 873 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 AHSA2Q719I0 299 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 LMNTD1Q8N9Z9 388 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 OR8J3Q8NGG0 315 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 APIPQ96GX9 242 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 ZBTB18Q99592 522 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 CLPBQ9H078 707 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 MAGEH1Q9H213 219 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 GORASP2Q9H8Y8 452 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 EIF3LQ9Y262 564 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 SLC38A8A6NNN8 435 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 M0R3G1 203 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 VIPP01282 170 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 EPORP19235 508 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 GNPDA1P46926 289 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZNF177Q13360 481 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 PCBP2Q15366 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMC3-201ENST00000361804 ALG1LQ6GMV1 187 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 NIPAL1Q6NVV3 410 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZCCHC8Q6NZY4 707 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 EFL1Q7Z2Z2 1120 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 PJA1Q8NG27 643 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PEX13Q92968 403 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 APOLD1Q96LR9 279 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 YTHDF1Q9BYJ9 559 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 COL6A3P12111 3177 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 GOLGA4Q13439 2230 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 MANBAO00462 879 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ITPKAP23677 461 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PTGER3P43115 390 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 RHOAP61586 193 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 PAGE2Q7Z2X7 111 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 RAVER1Q8IY67 606 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 CLECL1Q8IZS7 167 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 LEMD2Q8NC56 503 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZNF540Q8NDQ6 660 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PSMA8Q8TAA3 256 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 MYLIPQ8WY64 445 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 MAL2Q969L2 176 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 FUBP3Q96I24 572 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZNF347Q96SE7 839 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 BTBD2Q9BX70 525 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 BBS2Q9BXC9 721 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZBTB20Q9HC78 741 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 IL26Q9NPH9 171 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 AKIP1Q9NQ31 210 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CAB39Q9Y376 341 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 A0A096LPI6 279 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 RAD51BO15315 384 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PRAMEF4O60810 478 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 STC2O76061 302 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ESR1P03372 595 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 C21orf33P30042 268 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 ATP5C1P36542 298 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 NUDT6P53370 316 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 OXA1LQ15070 435 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 USP39Q53GS9 565 aaKnown RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 PRAMEF9Q5VWM5 478 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CPZQ66K79 652 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 LRRC8DQ7L1W4 858 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 TMEM150AQ86TG1 271 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ZSWIM9Q86XI8 627 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 SLC7A5P1Q8MH63 180 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ABHD8Q96I13 439 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 TPD52L3Q96J77 140 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 UROC1Q96N76 676 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CLMPQ9H6B4 373 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PARVBQ9HBI1 364 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 C16orf96A6NNT2 1141 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 IFRD1O00458 451 aaPredicted RBP10.31□□□□□ -0.76
SMC3-201ENST00000361804 YY2O15391 372 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 RGS14O43566 566 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 COL6A1P12109 1028 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CRISP3P54108 245 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 CHRNA6Q15825 494 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 ANKS3Q6ZW76 656 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 GPR149Q86SP6 731 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 TERB1Q8NA31 727 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 OR5K1Q8NHB7 308 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 RORBQ92753 470 aa10.31□□□□□ -0.76
SMC3-201ENST00000361804 PPP3R2Q96LZ3 170 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms