RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CTPS1P17812 591 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GGT1P19440 569 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 C4BPBP20851 252 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 YWHAQP27348 245 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GPC1P35052 558 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 KCNQ1P51787 676 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 BTG1P62324 171 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 SP2Q02086 613 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 FGFBP1Q14512 234 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GRM3Q14832 879 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GRIK4Q16099 956 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 KYAT1Q16773 422 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 LRRC17Q8N6Y2 441 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 SLC37A3Q8NCC5 494 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF675Q8TD23 568 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PMM1Q92871 262 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 TCEAL3Q969E4 200 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 RPL10LQ96L21 214 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 SPATA13Q96N96 652 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 P2RX7Q99572 595 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 MXRA8Q9BRK3 442 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 CHCHD6Q9BRQ6 235 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 TTYH1Q9H313 450 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ESRP2Q9H6T0 727 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 MAGIXQ9H6Y5 334 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 NT5DC2Q9H857 520 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 APOBEC3GQ9HC16 384 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GSN-AS1Q9NRJ2 163 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PURGQ9UJV8 347 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 EDARQ9UNE0 448 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 STUB1Q9UNE7 303 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PIPSLA2A3N6 862 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 SLC16A4O15374 487 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 SNAPC5O75971 98 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 CSF2P04141 144 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 POU2F1P14859 743 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 HNRNPLP14866 589 aaKnown RBP eCLIP11.32□□□□□ -0.61e-5■■■□□ 17.9
CNOT4-203ENST00000361528 POU1F1P28069 291 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GRK5P34947 590 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GLRBP48167 497 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 RORCP51449 518 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ATP12AP54707 1039 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 FGL1Q08830 312 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 WSCD2Q2TBF2 565 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 TDRD10Q5VZ19 366 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 KRT74Q7RTS7 529 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GPR78Q96P69 363 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF670Q9BS34 389 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 DPCDQ9BVM2 203 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 CEP41Q9BYV8 373 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 RHOJQ9H4E5 214 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 MLXQ9UH92 298 aa11.32□□□□□ -0.6
CNOT4-203ENST00000361528 PCDHGA9Q9Y5G4 932 aaKnown RBP11.32□□□□□ -0.6
CNOT4-203ENST00000361528 A0A087X1B8 175 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 E9PAM4 449 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PCDH17O14917 1159 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 VPS4BO75351 444 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 RECQL5O94762 991 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 IPO13O94829 963 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 HK1P19367 917 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 CSKP41240 450 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 OR4D2P58180 307 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 HOXC5Q00444 222 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 RCAN2Q14206 197 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FAM83EQ2M2I3 478 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FAM76BQ5HYJ3 339 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF425Q6IV72 752 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 EIF3MQ7L2H7 374 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF367Q7RTV3 350 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 C12orf40Q86WS4 652 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 HGDQ93099 445 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms