RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CD97P48960 835 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 PLA2G16P53816 162 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 PHEXP78562 749 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 C18orf21Q32NC0 220 aaPredicted RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 ATG9BQ674R7 924 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 ENPP6Q6UWR7 440 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 CELF5Q8N6W0 485 aaKnown RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 BPIFB6Q8NFQ5 453 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 SLC47A1Q96FL8 570 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 CSF3RQ99062 836 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 DPY30Q9C005 99 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 AMBRA1Q9C0C7 1298 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 DCAF13Q9NV06 445 aaKnown RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 CBX4O00257 560 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 CXCR6O00574 342 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 GNGT2O14610 69 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 TAPBPO15533 448 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 RYKP34925 604 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 RGS4P49798 205 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 IL18R1Q13478 541 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 ZNF77Q15935 545 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 NKG7Q16617 165 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 RFX4Q33E94 735 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 PLA2G4EQ3MJ16 856 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 MICU2Q8IYU8 434 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 CPXM2Q8N436 756 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 SLC15A4Q8N697 577 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 FAM86B1Q8N7N1 296 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 FBXO30Q8TB52 745 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 NUDT8Q8WV74 236 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 FAM126AQ9BYI3 521 aaPredicted RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
UBA3-202ENST00000361055 C3orf18Q9UK00 162 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 OARD1Q9Y530 152 aa12.11□□□□□ -0.47
UBA3-202ENST00000361055 LOC100130705A0A1B0GUX0 176 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 SLC16A6O15403 523 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 SULT1C4O75897 302 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 OCM2P0CE71 109 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
UBA3-202ENST00000361055 ZNF7P17097 686 aaPredicted RBP12.1□□□□□ -0.47
UBA3-202ENST00000361055 ITIH1P19827 911 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 HMGCLP35914 325 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 TPD52P55327 224 aaPredicted RBP12.1□□□□□ -0.47
UBA3-202ENST00000361055 ISL1P61371 349 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 GSTM4Q03013 218 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 SFSWAPQ12872 951 aaKnown RBP12.1□□□□□ -0.47
UBA3-202ENST00000361055 MEP1AQ16819 746 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 PTRHD1Q6GMV3 140 aaKnown RBP12.1□□□□□ -0.47
UBA3-202ENST00000361055 LINC00299Q6ZSB3 139 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 BBS7Q8IWZ6 715 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 MSRB3Q8IXL7 192 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 CENPSQ8N2Z9 138 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 KIAA1958Q8N8K9 716 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 MUL1Q969V5 352 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 RHBDF1Q96CC6 855 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 CCDC138Q96M89 665 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 C19orf43Q9BQ61 176 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 NTMT1Q9BV86 223 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 TBC1D14Q9P2M4 693 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 NAALAD2Q9Y3Q0 740 aa12.1□□□□□ -0.47
UBA3-202ENST00000361055 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 XIRP2A4UGR9 3374 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 A0A1B0GVM2 712 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 GFRA2O00451 464 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
UBA3-202ENST00000361055 FZD6O60353 706 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 ULK1O75385 1050 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 PRKD3O94806 890 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 CD160O95971 181 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 PGRP06401 933 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 CCDC159P0C7I6 412 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
UBA3-202ENST00000361055 PCSK2P16519 638 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 DGKAP23743 735 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 HSPA7P48741 367 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 RPL38P63173 70 aaKnown RBP12.09□□□□□ -0.47
UBA3-202ENST00000361055 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 KCNC4Q03721 635 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 CD47Q08722 323 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 KCNAB2Q13303 367 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 PON2Q15165 354 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 FAM174BQ3ZCQ3 159 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 INO80DQ53TQ3 878 aaPredicted RBP12.09□□□□□ -0.47
UBA3-202ENST00000361055 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
UBA3-202ENST00000361055 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
UBA3-202ENST00000361055 CALHM3Q86XJ0 350 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms