RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RFXANKO14593 260 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 NR4A1P22736 598 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 IGFBP5P24593 272 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CD70P32970 193 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 STK19P49842 368 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 GZMMP51124 257 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 EPHB3P54753 998 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 B4GALNT1Q00973 533 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 IL5RAQ01344 420 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ABHD18Q0P651 414 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SLC14A1Q13336 389 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 TOP3AQ13472 1001 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 BOP1Q14137 746 aaKnown RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 MOGQ16653 247 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 DGKKQ5KSL6 1271 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 LAIR2Q6ISS4 152 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GALNT18Q6P9A2 607 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 DOK6Q6PKX4 331 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 USP45Q70EL2 814 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 HIPK1Q86Z02 1210 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZDHHC21Q8IVQ6 265 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SLC22A15Q8IZD6 547 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 DDHD1Q8NEL9 900 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 FBXL8Q96CD0 374 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 APOLD1Q96LR9 279 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CSF3RQ99062 836 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 FUNDC2Q9BWH2 189 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 RAD21L1Q9H4I0 556 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GPN2Q9H9Y4 310 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 TBCCD1Q9NVR7 557 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 VNN3Q9NY84 501 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 TMEFF2Q9UIK5 374 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 MICAL3Q7RTP6 2002 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PITPNM1O00562 1244 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 WNT9AO14904 365 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 ZNF821O75541 412 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 SOD2P04179 222 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CKMP06732 381 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HIST1H2AGP0C0S8 130 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 OR56A5P0C7T3 313 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CYP4B1P13584 511 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HIST1H2ADP20671 130 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 MAPK1P28482 360 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 PTPN6P29350 595 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 BMXP51813 675 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CCL23P55773 120 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 ISL1P61371 349 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CYP4F8P98187 520 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 IL1RL1Q01638 556 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 GTF2H3Q13889 308 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 DPY19L1Q2PZI1 675 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 RFX4Q33E94 735 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 PTCHD3Q3KNS1 767 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 PLEKHG6Q3KR16 790 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 GGTA1PQ4G0N0 100 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 LRRC73Q5JTD7 316 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 OR4F3Q6IEY1 312 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 RFLNAQ6ZTI6 216 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 TPRG1Q6ZUI0 275 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 DEFB128Q7Z7B8 93 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 DCP2Q8IU60 420 aaKnown RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 FAM9CQ8IZT9 166 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 BEND7Q8N7W2 519 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 CNIH3Q8TBE1 160 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 NELL1Q92832 810 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 MUL1Q969V5 352 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 TESCQ96BS2 214 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 APIPQ96GX9 242 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HIST1H2AHQ96KK5 128 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 EGLN2Q96KS0 407 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 NODALQ96S42 347 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HIST1H2AJQ99878 128 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 H2AFJQ9BTM1 129 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 EBPLQ9BY08 206 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 PAK1IP1Q9NWT1 392 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 SAMD4AQ9UPU9 718 aaKnown RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 INSL5Q9Y5Q6 135 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 KCNE1BA0A087WTH5 132 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 AGAP14A8MT82 685 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 PQBP1O60828 265 aaKnown RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 MITFO75030 526 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 XYLBO75191 536 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CLPXO76031 633 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HOXB9P17482 250 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 IL1RNP18510 177 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 LHCGRP22888 699 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 ITPKAP23677 461 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 HTR1BP28222 390 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CTSOP43234 321 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 KIR3DL1P43629 444 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CSNK1DP48730 415 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 RAPSNQ13702 412 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 ZXDCQ2QGD7 858 aaPredicted RBP8.36□□□□□ -1.07
RFX3-202ENST00000358730 CPZQ66K79 652 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 NEK5Q6P3R8 708 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 CRTC3Q6UUV7 619 aa8.36□□□□□ -1.07
RFX3-202ENST00000358730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
RFX3-202ENST00000358730 BBS7Q8IWZ6 715 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms