RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CLDN7O95471 211 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GBAP04062 536 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 C21orf33P30042 268 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 HUNKP57058 714 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GPR162Q16538 588 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF404Q494X3 552 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SOWAHCQ53LP3 525 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF648Q5T619 568 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 XAF1Q6GPH4 301 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 PRSS55Q6UWB4 352 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SPATC1Q76KD6 591 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CCDC80Q76M96 950 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 PTRH1Q86Y79 214 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 RBFAQ8N0V3 343 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GOLM1Q8NBJ4 401 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GTF2H4Q92759 462 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SPATA17Q96L03 361 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SUSD3Q96L08 255 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 Q96MT0 163 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 VPS35Q96QK1 796 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 DSN1Q9H410 356 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GPN2Q9H9Y4 310 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 RPS6KA6Q9UK32 745 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SSC5DA1L4H1 1573 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MANBAO00462 879 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CACNG3O60359 315 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GJB5O95377 273 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ATXN8OSP0DMR3 200 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 EPHA2P29317 976 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CHI3L1P36222 383 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 RPP38P78345 283 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 PURAQ00577 322 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CACNG1Q06432 222 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SMARCB1Q12824 385 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GRB14Q14449 540 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GANABQ14697 944 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SYTL3Q4VX76 610 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 XKR6Q5GH73 641 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 DEPDC1Q5TB30 811 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CEP68Q76N32 757 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 B3GNT8Q7Z7M8 397 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ZBTB2Q8N680 514 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MAL2Q969L2 176 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 HSH2DQ96JZ2 352 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MBOAT4Q96T53 435 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 BEX2Q9BXY8 128 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 THUMPD1Q9NXG2 353 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 TRPM5Q9NZQ8 1165 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SNX6Q9UNH7 406 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SCML2Q9UQR0 700 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 K7ERQ8 282 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 TNFRSF11BO00300 401 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 PRRG1O14668 218 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SULT1C4O75897 302 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ALDH2P05091 517 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 PABPC1P11940 636 aaKnown RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 GADD45AP24522 165 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 TACR1P25103 407 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MAPK1P28482 360 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 RRM2P31350 389 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 INAVAQ3KP66 663 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF548Q8NEK5 533 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 OR8J3Q8NGG0 315 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MUL1Q969V5 352 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MYO19Q96H55 970 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 C1orf74Q96LT6 269 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 IL4I1Q96RQ9 567 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CORO1BQ9BR76 489 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 CNPPD1Q9BV87 410 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MAGEH1Q9H213 219 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
CSDE1-203ENST00000358528 ERVK13-1Q9NX77 482 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 RNF6Q9Y252 685 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SLC22A14Q9Y267 594 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 DLGAP4Q9Y2H0 992 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 FAM92AA1XBS5 289 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SAP18O00422 153 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CPNE6O95741 557 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 PDYNP01213 254 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 TRBC1P01850 177 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ALDH7A1P49419 539 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 GRSF1Q12849 480 aaKnown RBP eCLIP6.4□□□□□ -1.386e-6■■□□□ 12.3
CSDE1-203ENST00000358528 CHIT1Q13231 466 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 STARD3Q14849 445 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.383e-8■■■□□ 18.4
CSDE1-203ENST00000358528 CHRNA6Q15825 494 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 FAM110CQ1W6H9 321 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CTSL3PQ5NE16 218 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CATSPEREQ5SY80 951 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 ATAD3BQ5T9A4 648 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SUSD1Q6UWL2 747 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 C11orf96Q7Z7L8 435 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 FAM217AQ8IXS0 508 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 CLECL1Q8IZS7 167 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 WDR36Q8NI36 951 aaKnown RBP6.4□□□□□ -1.38
CSDE1-203ENST00000358528 KCNJ9Q92806 393 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 MYDGFQ969H8 173 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 SH3KBP1Q96B97 665 aa6.4□□□□□ -1.38
CSDE1-203ENST00000358528 COPS8Q99627 209 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms