RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RBBP8Q99708 897 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 RHOXF2Q9BQY4 288 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 SEMA6CQ9H3T2 930 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 SRMSQ9H3Y6 488 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 ACSS3Q9H6R3 686 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 LRRC4CQ9HCJ2 640 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 SIDT1Q9NXL6 827 aaKnown RBP3.85□□□□□ -1.79
CNOT4-202ENST00000356162 OR6C2Q9NZP2 312 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 TMEM9Q9P0T7 183 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 TXNDC16Q9P2K2 825 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 SATB2Q9UPW6 733 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 PSAT1Q9Y617 370 aa3.85□□□□□ -1.79
CNOT4-202ENST00000356162 CACNA1AO00555 2505 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 OR6C74A6NCV1 312 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ARHGEF33A8MVX0 844 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CXorf49A8MYA2 514 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 C2orf74A8MZ97 194 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CASC3O15234 703 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 PRMT3O60678 531 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 WISP3O95389 354 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ITGA2BP08514 1039 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CHRM5P08912 532 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TYRP1P17643 537 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 MCM3P25205 808 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CD82P27701 267 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CSTF2P33240 577 aaKnown RBP eCLIP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 SPRP35270 261 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 HSD17B2P37059 387 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ABCG1P45844 678 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 KPNA2P52292 529 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TIAL1Q01085 375 aaKnown RBP eCLIP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ABRQ12979 859 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 KIR2DS3Q14952 304 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ARHGAP19Q14CB8 494 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 NAA25Q14CX7 972 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 C16orf72Q14CZ0 275 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CYP2A13Q16696 494 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 SLC5A12Q1EHB4 618 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TBC1D25Q3MII6 688 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 KBTBD12Q3ZCT8 623 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 C3orf38Q5JPI3 329 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 COX20Q5RI15 118 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CACHD1Q5VU97 1274 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 IRGCQ6NXR0 463 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF574Q6ZN55 896 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 C3orf62Q6ZUJ4 267 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 USP53Q70EK8 1073 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TRMT10CQ7L0Y3 403 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TAOK1Q7L7X3 1001 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 RAB11FIP2Q7L804 512 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ARHGAP22Q7Z5H3 698 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 MARCH9Q86YJ5 346 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CTAGE3PQ8IX95 158 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 FBXO39Q8N4B4 442 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 NKAPQ8N5F7 415 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 PPM1NQ8N819 430 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 HMGCLL1Q8TB92 370 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 SKA2Q8WVK7 121 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ZCCHC14Q8WYQ9 949 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 KLHL6Q8WZ60 621 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ANKRD7Q92527 254 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 RAD51AP1Q96B01 352 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 LINGO1Q96FE5 620 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 PRR11Q96HE9 360 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF578Q96N58 590 aaPredicted RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CYTH2Q99418 400 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 OLFM1Q99784 485 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 CMKLR1Q99788 373 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 MENTQ9BUN1 341 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 DDA1Q9BW61 102 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 ACTR10Q9NZ32 417 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 GALPQ9UBC7 116 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 NFU1Q9UMS0 254 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 BTRCQ9Y297 605 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 TDRKHQ9Y2W6 561 aaKnown RBP3.84□□□□□ -1.79
CNOT4-202ENST00000356162 PCDHGA7Q9Y5G6 932 aa3.84□□□□□ -1.79
CNOT4-202ENST00000356162 A0A087WUV0 522 aaPredicted RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 A0A0J9YY10 115 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 A0A1W2PNU3 283 aaPredicted RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 GSAPA4D1B5 854 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 TRABD2BA6NFA1 517 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 EFCAB7A8K855 629 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 CDRT15L2A8MXV6 281 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 GFYI3L273 518 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 BTN3A3O00478 584 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 BRINP1O60477 761 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 CCNDBP1O95273 360 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 TSPAN12O95859 305 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 ENO2P09104 434 aaPredicted RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 JMJD7P0C870 316 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF37AP17032 561 aaPredicted RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 POLR2CP19387 275 aaPredicted RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 CYP2A7P20853 494 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 MAP4P27816 1152 aaKnown RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 RBMS1P29558 406 aaKnown RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 PEBP1P30086 187 aaKnown RBP3.84□□□□□ -1.8
CNOT4-202ENST00000356162 SERPINB9P50453 376 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 SLC12A2P55011 1212 aa3.84□□□□□ -1.8
CNOT4-202ENST00000356162 ERVPABLB-1P60509 514 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms