RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GLRA2P23416 452 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 CDH15P55291 814 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 DSC2Q02487 901 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 GPM6BQ13491 265 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 HMBOX1Q6NT76 420 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 CPSF7Q8N684 471 aaKnown RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 OR5AK3PQ8NH89 298 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 ATXN2LQ8WWM7 1075 aaKnown RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 FEM1AQ9BSK4 669 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 KBTBD4Q9NVX7 518 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 IL36AQ9UHA7 158 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 REXO2Q9Y3B8 237 aaKnown RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PLD2O14939 933 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 LRRC37A5PQ49AS3 106 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 LPCAT4Q643R3 524 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF550Q7Z398 422 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 HMCESQ96FZ2 354 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 TCF12Q99081 682 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 C5orf60A6NFR6 353 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 HDAC3O15379 428 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 FXYD6P3P58550 94 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF460Q14592 562 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.91■□□□□ 0.31e-7■□□□□ 11.1
COL27A1-201ENST00000356083 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF598Q86UK7 904 aaKnown RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 GJD3Q8N144 294 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 MTMR10Q9NXD2 777 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 C8AP07357 584 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 MRPL49Q13405 166 aaKnown RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 EIPR1Q53HC9 387 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SHDQ96IW2 340 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 CMKLR1Q99788 373 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 C11orf98E9PRG8 122 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SFTPBP07988 381 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SLC5A3P53794 718 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 RAB4BP61018 213 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 KCNJ2P63252 427 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 HM13Q8TCT9 377 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ANKRD27Q96NW4 1050 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 CCNL2Q96S94 520 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 OR2AG1Q9H205 316 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 UGT1A1P22309 533 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 GALK2Q01415 458 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 RUNDC3AQ59EK9 446 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 PNPLA2Q96AD5 504 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 TMEM41AQ96HV5 264 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 CCDC28BQ9BUN5 200 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 STRADBQ9C0K7 418 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 ERVK-5Q9HDB9 667 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 TDP1Q9NUW8 608 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 FRMPD4Q14CM0 1322 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 RNF13O43567 381 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 BST1Q10588 318 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SIDT2Q8NBJ9 832 aaKnown RBP16.91■□□□□ 0.3
COL27A1-201ENST00000356083 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 KCNC2Q96PR1 638 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 PNPLA3Q9NST1 481 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 FTSJ1Q9UET6 329 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 PCDHA2Q9Y5H9 948 aa16.91■□□□□ 0.3
COL27A1-201ENST00000356083 SMIM30A4D0T7 59 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SOX1O00570 391 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 ENTPD5O75356 428 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 ERCC1P07992 297 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 RBM48Q5RL73 367 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 ZDHHC4Q9NPG8 344 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 GNG13Q9P2W3 67 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 POP4O95707 220 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 CTHP32929 405 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 CRB2Q5IJ48 1285 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 OR4E2Q8NGC2 313 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 P2RY11Q96G91 374 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 OR51B6Q9H340 312 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 HEMK1Q9Y5R4 338 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 DPPA5A6NC42 116 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 VILLO15195 856 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 HK1P19367 917 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 LACTB2Q53H82 288 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 HSFY1Q96LI6 401 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 TREX2Q9BQ50 279 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 AASSQ9UDR5 926 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 CDC14AQ9UNH5 594 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 FER1L4A9Z1Z3 1794 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 B8ZZF3 427 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SLC5A9Q2M3M2 681 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SH3PXD2AQ5TCZ1 1133 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 PGM2L1Q6PCE3 622 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 DNM1P34Q6PK57 102 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SNX29P2Q8IUI4 249 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 CAVIN3Q969G5 261 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 BARD1Q99728 777 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 PLAGL1Q9UM63 463 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 GLI2P10070 1586 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 A0A1B0GVC2 190 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 KCNU1A8MYU2 1149 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms