RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 COPEO14579 308 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 CASC3O15234 703 aaKnown RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 JUPP14923 745 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 OAS2P29728 719 aaKnown RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 CCKBRP32239 447 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SLC18A2Q05940 514 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 ZFP36L1Q07352 338 aaKnown RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 TECRLQ5HYJ1 363 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SULT1C3Q6IMI6 304 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SPESP1Q6UW49 350 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 ZNF574Q6ZN55 896 aaPredicted RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 MBOAT1Q6ZNC8 495 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 DGLUCYQ7Z3D6 616 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SLITRK4Q8IW52 837 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SRRM1Q8IYB3 904 aaKnown RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 DCBLD1Q8N8Z6 715 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 OR2A14Q96R47 310 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SMC6Q96SB8 1091 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 STRADBQ9C0K7 418 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 PCBD2Q9H0N5 130 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 CNOT10Q9H9A5 744 aaKnown RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 CCDC177Q9NQR7 707 aaPredicted RBP15.03■□□□□ -0
TRIM13-201ENST00000356017 C1GALT1Q9NS00 363 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 ZNF358Q9NW07 568 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 SPHK1Q9NYA1 384 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 NUDT4Q9NZJ9 180 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 TMCO1Q9UM00 188 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 PCDHB11Q9Y5F2 797 aa15.03■□□□□ -0
TRIM13-201ENST00000356017 ASXL3Q9C0F0 2248 aa15.02■□□□□ -0
TRIM13-201ENST00000356017 IGHV5-10-1A0A0J9YXX1 117 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 NCF1BA6NI72 391 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 NCF1CA8MVU1 366 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 FOXO6A8MYZ6 492 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 SUPT3HB4E1H0 165 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 SUPT3HO75486 399 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 RASSF9O75901 435 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 ANKRD34CP0C6C1 535 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 THRAP10827 490 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 NCF1P14598 390 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 UGT2B7P16662 529 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 CRHR1P34998 444 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 RPA3P35244 121 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 KCNC1P48547 511 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 INHBCP55103 352 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 GFERP55789 205 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 FASTKQ14296 549 aaKnown RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 SF1Q15637 639 aaKnown RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 SLC5A12Q1EHB4 618 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 ISXQ2M1V0 245 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 CAPN13Q6MZZ7 669 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 FAM92BQ6ZTR7 304 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 TMPRSS9Q7Z410 1059 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 PRSS42Q7Z5A4 293 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 RAB44Q7Z6P3 723 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 LRRC56Q8IYG6 542 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 C2orf73Q8N5S3 287 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 PDPRQ8NCN5 879 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 RHBDF1Q96CC6 855 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 IQCGQ9H095 443 aaKnown RBP15.02□□□□□ -0.01
TRIM13-201ENST00000356017 ATG10Q9H0Y0 220 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 MKS1Q9NXB0 559 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 TMEM9Q9P0T7 183 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 KLHL3Q9UH77 587 aa15.02□□□□□ -0.01
TRIM13-201ENST00000356017 RP1P56715 2156 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 HGSO14964 777 aaPredicted RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 MAP3K7O43318 606 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 PRICKLE3O43900 615 aaPredicted RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 IPO13O94829 963 aaKnown RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 CCNDBP1O95273 360 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 TOP3BO95985 862 aaKnown RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 CDH3P22223 829 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 NAE1Q13564 534 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 TSTA3Q13630 321 aaPredicted RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 NAA25Q14CX7 972 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 CCDC153Q494R4 210 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 PHF19Q5T6S3 580 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 N4BP2L1Q5TBK1 243 aaPredicted RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 THEMIS2Q5TEJ8 643 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 CACHD1Q5VU97 1274 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 SUSD1Q6UWL2 747 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 TMPRSS7Q7RTY8 843 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 TAX1BP1Q86VP1 789 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 KMT5CQ86Y97 462 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 C4orf33Q8N1A6 199 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 LMNTD1Q8N9Z9 388 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 PPFIBP2Q8ND30 876 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 OR56A3Q8NH54 315 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 EXT2Q93063 718 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 MED8Q96G25 268 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 MIPEPQ99797 713 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 PITPNM3Q9BZ71 974 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 SEMA6CQ9H3T2 930 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 AKAP7Q9P0M2 348 aaPredicted RBP15.01□□□□□ -0.01
TRIM13-201ENST00000356017 TMEM216Q9P0N5 145 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 SEMA5BQ9P283 1151 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 XPR1Q9UBH6 696 aa15.01□□□□□ -0.01
TRIM13-201ENST00000356017 A0A1W2PPV9 198 aa15□□□□□ -0.01
TRIM13-201ENST00000356017 MAP2K7O14733 419 aa15□□□□□ -0.01
TRIM13-201ENST00000356017 CSO75390 466 aaKnown RBP15□□□□□ -0.01
TRIM13-201ENST00000356017 MTHFD2P13995 350 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms