RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SNRPNP63162 240 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 TMED2Q15363 201 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 ZNF470Q6ECI4 717 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 FRMPD2BQ6IN97 320 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 RHBDD2Q6NTF9 364 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 FIGLAQ6QHK4 219 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 MIPEPQ99797 713 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC6A20Q9NP91 592 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 STOX2Q9P2F5 926 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 SNX7Q9UNH6 387 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 SHANK1Q9Y566 2161 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 SDR42E2A6NKP2 422 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 ERGP11308 486 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 CCL11P51671 97 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 ADARP55265 1226 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 ATP1A4Q13733 1029 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 COX15Q7KZN9 410 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 HOOK3Q86VS8 718 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 MCATQ8IVS2 390 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 OR2A1Q8NGT9 310 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 SKA2Q8WVK7 121 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 MESP1Q9BRJ9 268 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 PLCL2Q9UPR0 1127 aa16.06■□□□□ 0.16
PDLIM7-201ENST00000355572 LOC105369274A0A096LPK9 316 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 IGKV1-8A0A0C4DH67 115 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 LOC102723532A0A0G2JNH3 316 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 PSIP1O75475 530 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 HAUS5O94927 633 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 ESR1P03372 595 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 UMODP07911 640 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 CHRM3P20309 590 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 GABRB3P28472 473 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 FNTAP49354 379 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 SF1Q15637 639 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 MLIPQ5VWP3 458 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 TCTN3Q6NUS6 607 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 CYHR1Q6ZMK1 362 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 SDCCAG8Q86SQ7 713 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 OR4N4Q8N0Y3 316 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 METTL27Q8N6F8 245 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 PPFIBP2Q8ND30 876 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 OR2L3Q8NG85 312 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 RAD51AP1Q96B01 352 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 PDLIM2Q96JY6 352 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 ZNF285Q96NJ3 590 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 TCF12Q99081 682 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 PKP4Q99569 1192 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 ING2Q9H160 280 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 XAB2Q9HCS7 855 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 MLXIPLQ9NP71 852 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
PDLIM7-201ENST00000355572 F8W8V4 182 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 MKRN2OSH3BPM6 223 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 TP73O15350 636 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 NRDCO43847 1150 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 USP1O94782 785 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CASRP41180 1078 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 DHX9Q08211 1270 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CYP2A13Q16696 494 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 NADK2Q4G0N4 442 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 MRPL14Q6P1L8 145 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 ASB18Q6ZVZ8 466 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 GPR135Q8IZ08 494 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 SHISA5Q8N114 240 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 HMGCLL1Q8TB92 370 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CD200R1Q8TD46 325 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 THAP4Q8WY91 577 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 DLG3Q92796 817 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 N4BP2L2Q92802 583 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CAPZA3Q96KX2 299 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 TRIM51Q9BSJ1 452 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 NUDT9Q9BW91 350 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 ACAT2Q9BWD1 397 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC7A5P2Q9GIP4 190 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 C20orf96Q9NUD7 363 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 SAMD15Q9P1V8 674 aa16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-201ENST00000355572 RELNP78509 3460 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 SCN3AQ9NY46 2000 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 A0A0J9YVX5 310 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 KPNA5O15131 536 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 ALOX12BO75342 701 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 CEACAM4O75871 244 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 RPN2P04844 631 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 ERVK-10P10266 1014 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 ATP5DP30049 168 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 OTX2P32243 289 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 CSRP3P50461 194 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 MLLT10P55197 1068 aa16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 SARNPP82979 210 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-201ENST00000355572 RAPSNQ13702 412 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms