RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CAPRIN1Q14444 709 aaKnown RBP24.93■■□□□ 1.58
CLK2-201ENST00000355560 TMEM259Q4ZIN3 620 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 SAMD4BQ5PRF9 694 aaKnown RBP24.93■■□□□ 1.58
CLK2-201ENST00000355560 IER5LQ5T953 404 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 SLC44A3Q8N4M1 653 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 BHLHE22Q8NFJ8 381 aaPredicted RBP24.93■■□□□ 1.58
CLK2-201ENST00000355560 LRRC58Q96CX6 371 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 ZDHHC5Q9C0B5 715 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 PRO3102Q9H379 93 aa24.93■■□□□ 1.58
CLK2-201ENST00000355560 LEF1Q9UJU2 399 aaPredicted RBP24.93■■□□□ 1.58
CLK2-201ENST00000355560 RSL1D1O76021 490 aaKnown RBP24.92■■□□□ 1.58
CLK2-201ENST00000355560 POU3F3P20264 500 aaPredicted RBP24.92■■□□□ 1.58
CLK2-201ENST00000355560 TEAD1P28347 426 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 RPA4Q13156 261 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 NFYCQ13952 458 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 PAGE3Q5JUK9 113 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 CACHD1Q5VU97 1274 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 PDZD3Q86UT5 571 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 LIX1Q8N485 282 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 MINDY1Q8N5J2 469 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 OR9A1PQ8NGU1 263 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 BCAP29Q9UHQ4 241 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 ASF1AQ9Y294 204 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 PRUNE2Q8WUY3 3088 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 ACOT8O14734 319 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 MAP3K7O43318 606 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 RNGTTO60942 597 aaKnown RBP24.92■■□□□ 1.58
CLK2-201ENST00000355560 BCAS2O75934 225 aaPredicted RBP24.92■■□□□ 1.58
CLK2-201ENST00000355560 GCKP35557 465 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 CASP2P42575 452 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 DOC2AQ14183 400 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 PRMT9Q6P2P2 845 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 OXR1Q8N573 874 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 SLC17A9Q9BYT1 436 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 PHPT1Q9NRX4 125 aaPredicted RBP24.92■■□□□ 1.58
CLK2-201ENST00000355560 ASIC5Q9NY37 505 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 CD300AQ9UGN4 299 aa24.92■■□□□ 1.58
CLK2-201ENST00000355560 VHLP40337 213 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TRIM25Q14258 630 aaKnown RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 KIAA0040Q15053 153 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TLR1Q15399 786 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 MAP7D1Q3KQU3 841 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 CAPN13Q6MZZ7 669 aaPredicted RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 UNC5DQ6UXZ4 953 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 SIPA1Q96FS4 1042 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 ABCD2Q9UBJ2 740 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3DA0A087WVF3 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3IA0A087WXS9 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3EA0A087X179 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3KA0A087X1G2 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 DYTNA2CJ06 578 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3FA6NER0 549 aaPredicted RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3LB9A6J9 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3HP0C7X1 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 MAT2AP31153 395 aaKnown RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 FOXM1Q08050 763 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TSTA3Q13630 321 aaPredicted RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3GQ6DHY5 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3CQ6IPX1 549 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 TBC1D3Q8IZP1 549 aaPredicted RBP24.91■■□□□ 1.58
CLK2-201ENST00000355560 NUDT8Q8WV74 236 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 DNASE1L2Q92874 299 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 PSMD13Q9UNM6 376 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 KCNE2Q9Y6J6 123 aa24.91■■□□□ 1.58
CLK2-201ENST00000355560 GPR89AB7ZAQ6 455 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 GPR89BP0CG08 455 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 MYCLP1P12525 358 aaPredicted RBP24.9■■□□□ 1.58
CLK2-201ENST00000355560 SLC6A2P23975 617 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 VARSP26640 1264 aaKnown RBP24.9■■□□□ 1.58
CLK2-201ENST00000355560 MRPS21P82921 87 aaKnown RBP24.9■■□□□ 1.58
CLK2-201ENST00000355560 GRHL2Q6ISB3 625 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 SUSD1Q6UWL2 747 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 HORMAD1Q86X24 394 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 PCDHAC1Q9H158 963 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 ITM2CQ9NQX7 267 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 SCML1Q9UN30 329 aa24.9■■□□□ 1.58
CLK2-201ENST00000355560 NME4O00746 187 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 KMOO15229 486 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 PRPH2P23942 346 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 USP39Q53GS9 565 aaKnown RBP24.89■■□□□ 1.58
CLK2-201ENST00000355560 FAM124AQ86V42 546 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 RNF175Q8N4F7 328 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 LMNTD1Q8N9Z9 388 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 NEIL2Q969S2 332 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 C1QTNF7Q9BXJ2 289 aa24.89■■□□□ 1.58
CLK2-201ENST00000355560 DNMT3AQ9Y6K1 912 aaPredicted RBP24.89■■□□□ 1.58
CLK2-201ENST00000355560 IGFALSP35858 605 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 HNF4AP41235 474 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 YBX1P67809 324 aaKnown RBP24.89■■□□□ 1.57
CLK2-201ENST00000355560 MRPS22P82650 360 aaKnown RBP24.89■■□□□ 1.57
CLK2-201ENST00000355560 METRNLQ641Q3 311 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 SLC2A7Q6PXP3 512 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 SLC15A3Q8IY34 581 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 OR5AR1Q8NGP9 310 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 RPLP0P6Q8NHW5 317 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 WDR20Q8TBZ3 569 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 ZBTB18Q99592 522 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 DPY30Q9C005 99 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 PREBQ9HCU5 417 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 FZD3Q9NPG1 666 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms