RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 C14orf105Q9NVL8 296 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 DKKL1Q9UK85 242 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 SPIN1Q9Y657 262 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 A8MU76 341 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 J3QLW9 94 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF19P17023 458 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 NSG1P42857 185 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 BNIP3Q12983 259 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 FKBP1CQ5VVH2 108 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 GPAT4Q86UL3 456 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CEP170Q5SW79 1584 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 DUXAA6NLW8 204 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ADAMTS3O15072 1205 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 AP2A1O95782 977 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 RHOQP17081 205 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 OR5B17Q8NGF7 314 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 NUS1Q96E22 293 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 RPL10LQ96L21 214 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 RIOK2Q9BVS4 552 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 POLR2J2Q9GZM3 115 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ACSS2Q9NR19 701 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 H3BSH0 61 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CD40LGP29965 261 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 MARCKSL1P49006 195 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ASB18Q6ZVZ8 466 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CD300LFQ8TDQ1 290 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 THEM6Q8WUY1 208 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 RAB11FIP5Q9BXF6 653 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 XKR8Q9H6D3 395 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CARS2Q9HA77 564 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 FCF1Q9Y324 198 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1W2PQ45 241 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1W2PQY0 241 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 MAFKO60675 156 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 HMGN1P05114 100 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ANXA3P12429 323 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ARL13AQ5H913 290 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 GPR153Q6NV75 609 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 SHQ1Q6PI26 577 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 PLA2G15Q8NCC3 412 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 B3GNT5Q9BYG0 378 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 FN3KQ9H479 309 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 INO80Q9ULG1 1556 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 IFI30P13284 250 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 SELPP16109 830 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 NFATC2Q13469 925 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 VMACQ2NL98 169 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 WSCD2Q2TBF2 565 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 NOXRED1Q6NXP6 359 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 SIDT2Q8NBJ9 832 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CPT1CQ8TCG5 803 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 NECAB3Q96P71 396 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 KAT8Q9H7Z6 458 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 GLI2P10070 1586 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 TPSB2P20231 275 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 FMO3P31513 532 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 TPSAB1Q15661 275 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 TIGD6Q17RP2 521 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 PPP2R2DQ66LE6 453 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 RGMBQ6NW40 437 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 ARL9Q6T311 187 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC24A5Q71RS6 500 aa5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 LNX1Q8TBB1 728 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 EIF2B4Q9UI10 523 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-201ENST00000355086 CEMIPQ8WUJ3 1361 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 LRRC7Q96NW7 1537 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MDFIC2A0A1B0GVS7 189 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A1W2PPM1 405 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SCELO95171 688 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RAB36O95755 333 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SMARCD2Q92925 531 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PLD4Q96BZ4 506 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 GTF2IRD1Q9UHL9 959 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 KCNS2Q9ULS6 477 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RPL26L1Q9UNX3 145 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDH7O60245 1069 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 DSC2Q02487 901 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SCARB2Q14108 478 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CYP27C1Q4G0S4 372 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 C7orf61Q8IZ16 206 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 FAM46DQ8NEK8 389 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RGMAQ96B86 450 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TM9SF2Q99805 663 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 POU2F3Q9UKI9 436 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 RPL36Q9Y3U8 105 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 C2orf92A0A1B0GVN3 265 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SMAD9O15198 467 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PPM1BO75688 479 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 TSTD1Q8NFU3 115 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ORAI3Q9BRQ5 295 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 CUEDC1Q9NWM3 386 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 SPATA7Q9P0W8 599 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 AGR2O95994 175 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PRPS2P11908 318 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 ENTPD1P49961 510 aa5.66□□□□□ -1.5
SRGAP1-201ENST00000355086 PURBQ96QR8 312 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms