RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 FAM98BQ52LJ0 330 aaKnown RBP16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 ZNF678Q5SXM1 525 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 C6orf132Q5T0Z8 1188 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 TMEM207Q6UWW9 146 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 CCDC117Q8IWD4 279 aaPredicted RBP16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 ZBTB44Q8NCP5 570 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 SH3RF2Q8TEC5 729 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 KCNS3Q9BQ31 491 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 PRKD2Q9BZL6 878 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 POLMQ9NP87 494 aaPredicted RBP16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 SCN3BQ9NY72 215 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 TNFRSF10DQ9UBN6 386 aa16.49■□□□□ 0.23
ARFGAP1-201ENST00000353546 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 SLC16A6O15403 523 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 HTR1EP28566 365 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 CTSKP43235 329 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 CDKN2DP55273 166 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 WNT3AP56704 352 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 EEFSECP57772 596 aaKnown RBP16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 UNC50Q53HI1 259 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PIK3R6Q5UE93 754 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PROSER1Q86XN7 944 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 TCTE3Q8IZS6 198 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 OR8H1Q8NGG4 311 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 FBXO30Q8TB52 745 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 TSPAN17Q96FV3 270 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 CCSER2Q9H7U1 834 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 DNAJC15Q9Y5T4 150 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 SNX8Q9Y5X2 465 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 GNGT2O14610 69 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 TULP3O75386 442 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PFKLP17858 780 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PRIM2P49643 509 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 DIO3P55073 304 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 SH3BP2P78314 561 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■■□ 25.6
ARFGAP1-201ENST00000353546 AHSA2Q719I0 299 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 ISCA2Q86U28 154 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 PIM3Q86V86 326 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 USB1Q9BQ65 265 aaKnown RBP16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 SLC30A2Q9BRI3 323 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 TRMOQ9BU70 441 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 OR51E2Q9H255 320 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 FARSBQ9NSD9 589 aaKnown RBP16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 DNAJB9Q9UBS3 223 aa16.48■□□□□ 0.23
ARFGAP1-201ENST00000353546 LAMA2P24043 3122 aaKnown RBP16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 LINC00862A6NCI5 91 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 SERPINI2O75830 405 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 CDK14O94921 469 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 C1RP00736 705 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 CSF2P04141 144 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 TNNI3P19429 210 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 MYL9P24844 172 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 DAB2P98082 770 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 ZNF33BQ06732 778 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 RPS6KA2Q15349 733 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 TRIM60Q495X7 471 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 DUSP28Q4G0W2 176 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 PHC2Q8IXK0 858 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 OR52K2Q8NGK3 314 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 OR6P1Q8NGX9 317 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 SETD6Q8TBK2 473 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 UBE2FQ969M7 185 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 ZNF224Q9NZL3 707 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 FNDC1Q4ZHG4 1894 aaPredicted RBP16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 FAM20BO75063 409 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 ATF6P18850 670 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 MVKQ03426 396 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 SPATS1Q496A3 300 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 GARNL3Q5VVW2 1013 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 BRAT1Q6PJG6 821 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 PRSS42Q7Z5A4 293 aa16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 PCNPQ8WW12 178 aaKnown RBP16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 CCDC59Q9P031 241 aaKnown RBP16.47■□□□□ 0.23
ARFGAP1-201ENST00000353546 CASTOR2A6NHX0 329 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 PAGE1O75459 146 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 SIX3O95343 332 aaPredicted RBP16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 HOXD4P09016 255 aaPredicted RBP16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 TNFSF8P32971 234 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 LHX1P48742 406 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 ARHGDIAP52565 204 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 TAF12Q16514 161 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 NECAB2Q7Z6G3 386 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 TMC8Q8IU68 726 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 CILP2Q8IUL8 1156 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 UBE2J2Q8N2K1 259 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 PTERQ96BW5 349 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 L3HYPDHQ96EM0 354 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 SMARCD1Q96GM5 515 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 CEP19Q96LK0 163 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 SDR39U1Q9NRG7 319 aaPredicted RBP16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 CRYL1Q9Y2S2 319 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 A0A1W2PP18 115 aa16.46■□□□□ 0.23
ARFGAP1-201ENST00000353546 A0A1W2PQ09 198 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms