RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GPR137Q96N19 417 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 IL1RAPQ9NPH3 570 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 SEMA4BQ9NPR2 832 aaPredicted RBP12.93□□□□□ -0.34
IFT88-202ENST00000351808 TAS2R16Q9NYV7 291 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 VPS9D1Q9Y2B5 631 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 E9PAM4 449 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ACKR2O00590 384 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 FABP7O15540 132 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 PAHP00439 452 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 SERPINA1P01009 418 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 CDK1P06493 297 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 NFICP08651 508 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 COL19A1Q14993 1142 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 GPR68Q15743 365 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 PDZK1Q5T2W1 519 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 GPALPP1Q8IXQ4 340 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 AADATQ8N5Z0 425 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 CCDC115Q96NT0 180 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 SAV1Q9H4B6 383 aaPredicted RBP12.93□□□□□ -0.34
IFT88-202ENST00000351808 PAK6Q9NQU5 681 aaPredicted RBP12.93□□□□□ -0.34
IFT88-202ENST00000351808 GPR83Q9NYM4 423 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 KLK4Q9Y5K2 254 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 HRH3Q9Y5N1 445 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ELOVL7A1L3X0 281 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 F9P00740 461 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 JCHAINP01591 159 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 FCER2P06734 321 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 TGFB3P10600 412 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 GPC1P35052 558 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 GMPSP49915 693 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 YWHAHQ04917 246 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 GRIK2Q13002 908 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 LARS2Q15031 903 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 CACHD1Q5VU97 1274 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PIM3Q86V86 326 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 OR8K5Q8NH50 307 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 MYDGFQ969H8 173 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 QRFPRQ96P65 431 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 RACGAP1Q9H0H5 632 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 NEUROG3Q9Y4Z2 214 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 SHROOM3Q8TF72 1996 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 FZD9O00144 591 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ARVCFO00192 962 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 KCNQ2O43526 872 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 TRIM3O75382 744 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 GPX5O75715 221 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PRR35P0CG20 571 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 CXCL8P10145 99 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 LCP1P13796 627 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PRDX3P30048 256 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 GBX2P52951 348 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 RAB25P57735 213 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 BAMBIQ13145 260 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 FGFBP1Q14512 234 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 PAFAH1B3Q15102 231 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ZNF648Q5T619 568 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 HECTD2Q5U5R9 776 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ZPBP2Q6X784 338 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 KDELC2Q7Z4H8 507 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ZDHHC21Q8IVQ6 265 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 OR2T11Q8NH01 316 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 SENP8Q96LD8 212 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 TEKT5Q96M29 485 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 TMEM209Q96SK2 561 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 DPCDQ9BVM2 203 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 SLC6A17Q9H1V8 727 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 ASB7Q9H672 318 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 KRT84Q9NSB2 600 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
IFT88-202ENST00000351808 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 ZNF490Q9ULM2 529 aaPredicted RBP12.92□□□□□ -0.34
IFT88-202ENST00000351808 LY75O60449 1722 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms