RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 KIAA0754O94854 1291 aa21.3■■□□□ 1
SNX3-202ENST00000349379 MAP4P27816 1152 aaKnown RBP21.3■■□□□ 1
SNX3-202ENST00000349379 OAS2P29728 719 aaKnown RBP21.3■■□□□ 1
SNX3-202ENST00000349379 RGS4P49798 205 aa21.3■■□□□ 1
SNX3-202ENST00000349379 VAC14Q08AM6 782 aa21.3■■□□□ 1
SNX3-202ENST00000349379 MANEAQ5SRI9 462 aa21.3■■□□□ 1
SNX3-202ENST00000349379 INO80CQ6PI98 192 aaPredicted RBP21.3■■□□□ 1
SNX3-202ENST00000349379 C3orf62Q6ZUJ4 267 aa21.3■■□□□ 1
SNX3-202ENST00000349379 VASH2Q86V25 355 aa21.3■■□□□ 1
SNX3-202ENST00000349379 TAX1BP1Q86VP1 789 aa21.3■■□□□ 1
SNX3-202ENST00000349379 CCDC25Q86WR0 208 aa21.3■■□□□ 1
SNX3-202ENST00000349379 C2orf73Q8N5S3 287 aaPredicted RBP21.3■■□□□ 1
SNX3-202ENST00000349379 CEP112Q8N8E3 955 aa21.3■■□□□ 1
SNX3-202ENST00000349379 EEF1AKMT1Q8WVE0 214 aa21.3■■□□□ 1
SNX3-202ENST00000349379 DLG3Q92796 817 aa21.3■■□□□ 1
SNX3-202ENST00000349379 PKP4Q99569 1192 aa21.3■■□□□ 1
SNX3-202ENST00000349379 LNPEPQ9UIQ6 1025 aa21.3■■□□□ 1
SNX3-202ENST00000349379 FAM208BQ5VWN6 2430 aa21.3■■□□□ 1
SNX3-202ENST00000349379 TEX51A0A1B0GUA7 166 aa21.29■■□□□ 1
SNX3-202ENST00000349379 PIAS1O75925 651 aa21.29■■□□□ 1
SNX3-202ENST00000349379 WT1P19544 449 aaPredicted RBP21.29■■□□□ 1
SNX3-202ENST00000349379 HSD17B2P37059 387 aa21.29■■□□□ 1
SNX3-202ENST00000349379 PGGT1BP53609 377 aa21.29■■□□□ 1
SNX3-202ENST00000349379 CXADRP78310 365 aa21.29■■□□□ 1
SNX3-202ENST00000349379 ABHD18Q0P651 414 aa21.29■■□□□ 1
SNX3-202ENST00000349379 ILF2Q12905 390 aaKnown RBP21.29■■□□□ 1
SNX3-202ENST00000349379 FASTKQ14296 549 aaKnown RBP21.29■■□□□ 1
SNX3-202ENST00000349379 CCDC81Q6ZN84 652 aa21.29■■□□□ 1
SNX3-202ENST00000349379 FAM20CQ8IXL6 584 aa21.29■■□□□ 1
SNX3-202ENST00000349379 ESX1Q8N693 406 aa21.29■■□□□ 1
SNX3-202ENST00000349379 IL22RA1Q8N6P7 574 aa21.29■■□□□ 1
SNX3-202ENST00000349379 OR2A1Q8NGT9 310 aa21.29■■□□□ 1
SNX3-202ENST00000349379 CDKL2Q92772 493 aa21.29■■□□□ 1
SNX3-202ENST00000349379 FANCEQ9HB96 536 aa21.29■■□□□ 1
SNX3-202ENST00000349379 KLK4Q9Y5K2 254 aa21.29■■□□□ 1
SNX3-202ENST00000349379 FAM95CA0A1B0GW59 222 aa21.28■■□□□ 1
SNX3-202ENST00000349379 H3BMH7 237 aa21.28■■□□□ 1
SNX3-202ENST00000349379 MAP3K7O43318 606 aa21.28■■□□□ 1
SNX3-202ENST00000349379 HCRTR1O43613 425 aa21.28■■□□□ 1
SNX3-202ENST00000349379 ZBTB14O43829 449 aa21.28■■□□□ 1
SNX3-202ENST00000349379 MAGP20916 626 aa21.28■■□□□ 1
SNX3-202ENST00000349379 ECHS1P30084 290 aa21.28■■□□□ 1
SNX3-202ENST00000349379 SP140Q13342 867 aa21.28■■□□□ 1
SNX3-202ENST00000349379 PDAP1Q13442 181 aaKnown RBP21.28■■□□□ 1
SNX3-202ENST00000349379 RELL1Q8IUW5 271 aa21.28■■□□□ 1
SNX3-202ENST00000349379 LRRC56Q8IYG6 542 aaPredicted RBP21.28■■□□□ 1
SNX3-202ENST00000349379 DNAJC22Q8N4W6 341 aa21.28■■□□□ 1
SNX3-202ENST00000349379 GALNT6Q8NCL4 622 aa21.28■■□□□ 1
SNX3-202ENST00000349379 OR1L3Q8NH93 324 aa21.28■■□□□ 1
SNX3-202ENST00000349379 ZNF480Q8WV37 535 aa21.28■■□□□ 1
SNX3-202ENST00000349379 LINGO1Q96FE5 620 aa21.28■■□□□ 1
SNX3-202ENST00000349379 VPS39Q96JC1 886 aa21.28■■□□□ 1
SNX3-202ENST00000349379 SLC12A9Q9BXP2 914 aa21.28■■□□□ 1
SNX3-202ENST00000349379 ADAMTS6Q9UKP5 1117 aa21.28■■□□□ 1
SNX3-202ENST00000349379 PCDHB3Q9Y5E6 796 aa21.28■■□□□ 1
SNX3-202ENST00000349379 LOC101059948A0A1B0GTJ6 334 aa21.27■■□□□ 1
SNX3-202ENST00000349379 TMEM150CB9EJG8 249 aa21.27■■□□□ 1
SNX3-202ENST00000349379 TERTO14746 1132 aaKnown RBP21.27■■□□□ 1
SNX3-202ENST00000349379 SLC16A5O15375 505 aa21.27■■□□□ 1
SNX3-202ENST00000349379 SLC16A8O95907 504 aa21.27■■□□□ 1
SNX3-202ENST00000349379 C8GP07360 202 aa21.27■■□□□ 1
SNX3-202ENST00000349379 ZNF37AP17032 561 aaPredicted RBP21.27■■□□□ 1
SNX3-202ENST00000349379 PSMB5P28074 263 aa21.27■■□□□ 1
SNX3-202ENST00000349379 STAT5AP42229 794 aa21.27■■□□□ 1
SNX3-202ENST00000349379 PNLIPRP1P54315 467 aa21.27■■□□□ 1
SNX3-202ENST00000349379 TAS2R39P59534 338 aa21.27■■□□□ 1
SNX3-202ENST00000349379 IL2P60568 153 aa21.27■■□□□ 1
SNX3-202ENST00000349379 SF1Q15637 639 aaKnown RBP21.27■■□□□ 1
SNX3-202ENST00000349379 KIAA1614Q5VZ46 1190 aa21.27■■□□□ 1
SNX3-202ENST00000349379 TMEM207Q6UWW9 146 aa21.27■■□□□ 1
SNX3-202ENST00000349379 C6orf15Q6UXA7 325 aaPredicted RBP21.27■■□□□ 1
SNX3-202ENST00000349379 UBE2R2Q712K3 238 aaPredicted RBP21.27■■□□□ 1
SNX3-202ENST00000349379 GPR155Q7Z3F1 870 aa21.27■■□□□ 1
SNX3-202ENST00000349379 MYO1HQ8N1T3 1032 aa21.27■■□□□ 1
SNX3-202ENST00000349379 OR2L3Q8NG85 312 aa21.27■■□□□ 1
SNX3-202ENST00000349379 SMPDL3AQ92484 453 aa21.27■■□□□ 1
SNX3-202ENST00000349379 RNF31Q96EP0 1072 aa21.27■■□□□ 1
SNX3-202ENST00000349379 PDLIM5Q96HC4 596 aaKnown RBP21.27■■□□□ 1
SNX3-202ENST00000349379 CPNE1Q99829 537 aa21.27■■□□□ 1
SNX3-202ENST00000349379 LOC400499M0QZD8 3231 aa21.27■□□□□ 0.99
SNX3-202ENST00000349379 E7ENX8 843 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 SCRG1O75711 98 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 WISP3O95389 354 aaPredicted RBP21.26■□□□□ 0.99
SNX3-202ENST00000349379 MT-ND3P03897 115 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 LIFP15018 202 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 IMPA1P29218 277 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 TAP2Q03519 686 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 ARHGAP40Q5TG30 622 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 FCRL6Q6DN72 434 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 LRFN5Q96NI6 719 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 RBBP8Q99708 897 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 INTS7Q9NVH2 962 aaKnown RBP21.26■□□□□ 0.99
SNX3-202ENST00000349379 PDE10AQ9Y233 779 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 KLHL20Q9Y2M5 609 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 PCDHGA4Q9Y5G9 962 aa21.26■□□□□ 0.99
SNX3-202ENST00000349379 ZNF839A8K0R7 811 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 TARM1B6A8C7 271 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 CPNE3O75131 537 aaKnown RBP21.25■□□□□ 0.99
SNX3-202ENST00000349379 NTRK1P04629 796 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 CYP2A7P20853 494 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms