RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 GBX1Q14549 363 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 SPANXN3Q5MJ09 141 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 BROXQ5VW32 411 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 PWWP2BQ6NUJ5 590 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 ZNF449Q6P9G9 518 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 TMEM135Q86UB9 458 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 OOSP2Q86WS3 158 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 CTAGE3PQ8IX95 158 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 D2HGDHQ8N465 521 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 PPM1NQ8N819 430 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 LCN9Q8WX39 176 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
RAB5C-201ENST00000346213 ALKBH8Q96BT7 664 aaKnown RBP15.56■□□□□ 0.08
RAB5C-201ENST00000346213 ASF1AQ9Y294 204 aa15.56■□□□□ 0.08
RAB5C-201ENST00000346213 MAGEB16A2A368 324 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 TYROBPO43914 113 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 FGF5P12034 268 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 CD82P27701 267 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 PRDX3P30048 256 aaKnown RBP15.55■□□□□ 0.08
RAB5C-201ENST00000346213 FMO4P31512 558 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 NAB1Q13506 487 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 LY6DQ14210 128 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 FRG1Q14331 258 aaKnown RBP15.55■□□□□ 0.08
RAB5C-201ENST00000346213 LGSNQ5TDP6 509 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 LYPLAL1Q5VWZ2 237 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 LCN10Q6JVE6 187 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 TRMT10BQ6PF06 316 aaKnown RBP15.55■□□□□ 0.08
RAB5C-201ENST00000346213 TMEM151BQ8IW70 566 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 CACNA2D3Q8IZS8 1091 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 CNPY4Q8N129 248 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 ANKRD42Q8N9B4 389 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 GALNT6Q8NCL4 622 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 OR5K2Q8NHB8 316 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 DENND1AQ8TEH3 1009 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 ZFPM2Q8WW38 1151 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 ZNF317Q96PQ6 595 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-201ENST00000346213 OR2A14Q96R47 310 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 SLC12A9Q9BXP2 914 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 PITPNM3Q9BZ71 974 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 ASPSCR1Q9BZE9 553 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 SRMSQ9H3Y6 488 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 MVB12BQ9H7P6 319 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 FAM60AQ9NP50 221 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 CRYL1Q9Y2S2 319 aa15.55■□□□□ 0.08
RAB5C-201ENST00000346213 ATXN7O15265 892 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SLCO2B1O94956 709 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 S1PR4O95977 384 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SNRPAP09012 282 aaKnown RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 RPS3P23396 243 aaKnown RBP eCLIP15.54■□□□□ 0.086e-7■□□□□ 11.3
RAB5C-201ENST00000346213 BDKRB1P46663 353 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SERPINB9P50453 376 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 PGGT1BP53609 377 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 UCNP55089 124 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 MPP1Q00013 466 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TIAL1Q01085 375 aaKnown RBP eCLIP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CTBP1Q13363 440 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TUBB3Q13509 450 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 LAMB3Q13751 1172 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CRYMQ14894 314 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SYTL3Q4VX76 610 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 MANEAQ5SRI9 462 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TMEM164Q5U3C3 297 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CEACAM20Q6UY09 585 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 AMIGO1Q86WK6 493 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CILP2Q8IUL8 1156 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 C2orf73Q8N5S3 287 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 EXD3Q8N9H8 876 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 ZNF473Q8WTR7 871 aaKnown RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CKAP2Q8WWK9 683 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 ZNF501Q96CX3 271 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 ULBP3Q9BZM4 244 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 FBXO6Q9NRD1 293 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 ACTR10Q9NZ32 417 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SAMD15Q9P1V8 674 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 KLHL20Q9Y2M5 609 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TDRKHQ9Y2W6 561 aaKnown RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 COLEC10Q9Y6Z7 277 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 PIEZO2Q9H5I5 2752 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 FAM237BA0A1B0GVD1 139 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 UBA6A0AVT1 1052 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 GSAPA4D1B5 854 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 H3BMH7 237 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 IFRD1O00458 451 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 NRP2O60462 931 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SPAG7O75391 227 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 MT-ND3P03897 115 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 FURINP09958 794 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 UGT2B7P16662 529 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 KRT4P19013 534 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 NDUFS1P28331 727 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 STAT5AP42229 794 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 SLC1A2P43004 574 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 GABRA4P48169 554 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 TTPAP49638 278 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 YBX1P67809 324 aaKnown RBP15.54■□□□□ 0.08
RAB5C-201ENST00000346213 FAM69BQ5VUD6 431 aa15.54■□□□□ 0.08
RAB5C-201ENST00000346213 C4orf33Q8N1A6 199 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms