RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RRAS2P62070 204 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 ERVK-8P63133 956 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 DBPQ10586 325 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 CSTF3Q12996 717 aaKnown RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 PWP1Q13610 501 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 SLC14A2Q15849 920 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 LRRC66Q68CR7 880 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 BICRALQ6AI39 1079 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 ZFAND4Q86XD8 727 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 SIAH1Q8IUQ4 282 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 CEP97Q8IW35 865 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 C9orf62Q8N4C0 152 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 DTX3Q8N9I9 347 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 TTC29Q8NA56 475 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 C2CD4AQ8NCU7 369 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 OR5T2Q8NGG2 359 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 BTN2A2Q8WVV5 523 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 CENPIQ92674 756 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 C3orf30Q96M34 536 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 TMEM74Q96NL1 305 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 HDHD5Q9BXW7 423 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 MMP28Q9H239 520 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 IFT46Q9NQC8 304 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 FBXO40Q9UH90 709 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 SLC23A1Q9UHI7 598 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 ADGRE2Q9UHX3 823 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 PKP3Q9Y446 797 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 CMAHPQ9Y471 501 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 PCDHGB3Q9Y5G1 929 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 V9GYH0 126 aa7.94□□□□□ -1.14
ATG4A-201ENST00000343524 FNDC1Q4ZHG4 1894 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-201ENST00000343524 NRCAMQ92823 1304 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ASPDHA6ND91 283 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 NEMP2A6NFY4 417 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 M0R082 166 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 SH3BP5O60239 455 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 SNAPC5O75971 98 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 MT-CO1P00395 513 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CDK1P06493 297 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RRASP10301 218 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PRKAR1AP10644 381 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 NFKB1P19838 968 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 C4BPBP20851 252 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ALAS2P22557 587 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RPS3P23396 243 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CHMP24386 653 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PTPN3P26045 913 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 NMBRP28336 390 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 NOS2P35228 1153 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RECQLP46063 649 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 NRIP1P48552 1158 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CCT3P49368 545 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RGS6P49758 472 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RORCP51449 518 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 GTF2A2P52657 109 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LIMK1P53667 647 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CYP4F2P78329 520 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PSPHP78330 225 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CYP4F3Q08477 520 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CRHR2Q13324 411 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TATDN3Q17R31 274 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 HKDC1Q2TB90 917 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 INO80DQ53TQ3 878 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 XKR3Q5GH77 459 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PAGE3Q5JUK9 113 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CERCAMQ5T4B2 595 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RAP1GAP2Q684P5 730 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KDM4DQ6B0I6 523 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KIAA0930Q6ICG6 404 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CDC42EP5Q6NZY7 148 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PKN3Q6P5Z2 889 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 BBS7Q8IWZ6 715 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PHC2Q8IXK0 858 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TAGAPQ8N103 731 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 C1orf52Q8N6N3 182 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF680Q8NEM1 530 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LPCAT1Q8NF37 534 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 DNAJB8Q8NHS0 232 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FBXO30Q8TB52 745 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CHTF18Q8WVB6 975 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ACOX2Q99424 681 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PELOQ9BRX2 385 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KATNAL1Q9BW62 490 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF416Q9BWM5 594 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 MRPL4Q9BYD3 311 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 HAPLN2Q9GZV7 340 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PORCNQ9H237 461 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CATSPERBQ9H7T0 1116 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TNFRSF12AQ9NP84 129 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 MID1IP1Q9NPA3 183 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 EXD2Q9NVH0 621 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RAB23Q9ULC3 237 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LAMA3Q16787 3333 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ELOVL7A1L3X0 281 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KRBOX1C9JBD0 128 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CXCR6O00574 342 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 UBFD1O14562 309 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms