RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 REEP1Q9H902 201 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 LTB4R2Q9NPC1 389 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 SERINC1Q9NRX5 453 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 E7EQ34 232 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 BMP7P18075 431 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PDSS1Q5T2R2 415 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 ASPGQ86U10 573 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 TRIM69Q86WT6 500 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PEX5LQ8IYB4 626 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PRTFDC1Q9NRG1 225 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 LAMB2P55268 1798 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 DRGXA6NNA5 263 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 MAP2K7O14733 419 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CCNA2P20248 432 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SERPINB1P30740 379 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CLEC6AQ6EIG7 209 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 PTCHD1Q96NR3 888 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 OR8D2Q9GZM6 311 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 USE1Q9NZ43 259 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 COQ9O75208 318 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ITGA2P17301 1181 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CLCN7P51798 805 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SNTA1Q13424 505 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ZNF77Q15935 545 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SCUBE1Q8IWY4 988 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CALML5Q9NZT1 146 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 MRPS15P82914 257 aaKnown RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 LRP8Q14114 963 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CCSAPQ6IQ19 270 aaPredicted RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ZNF527Q8NB42 609 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CNDP2Q96KP4 475 aaKnown RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 DKKL1Q9UK85 242 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 BPIP17213 487 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SDHBP21912 280 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 OR4D2P58180 307 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ARHGAP8P85298 464 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 NFE2L1Q14494 772 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 GRM7Q14831 915 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TSSK4Q6SA08 328 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 RBM12BQ8IXT5 1001 aaKnown RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 RELTQ969Z4 430 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 SLC35G5Q96KT7 338 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 C1orf109Q9NX04 203 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TLR4O00206 839 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 ALOX5P09917 674 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TCF3P15923 654 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TPP2P29144 1249 aaPredicted RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 FOLR3P41439 243 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 RAD23AP54725 363 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 NRG1Q02297 640 aaPredicted RBP12.49□□□□□ -0.41
LIN54-201ENST00000340417 NFATC4Q14934 902 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 C12orf40Q86WS4 652 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 CILP2Q8IUL8 1156 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 PLEKHG4BQ96PX9 1271 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
LIN54-201ENST00000340417 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 PRSS38A1L453 326 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 M0R296 226 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 CDC123O75794 336 aaPredicted RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 KLK1P06870 262 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 BPGMP07738 259 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 TIMP2P16035 220 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 RACK1P63244 317 aaKnown RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 ADGRG6Q86SQ4 1221 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 RNF148Q8N7C7 305 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 OR10H5Q8NGA6 315 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 SLC6A17Q9H1V8 727 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 COPG1Q9Y678 874 aaKnown RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 TK2O00142 265 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 PRPS2P11908 318 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 ARSFP54793 590 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 ABATP80404 500 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 REXO4Q9GZR2 422 aaKnown RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 COL4A5P29400 1685 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 DYTNA2CJ06 578 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms