RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ATP13A2Q9NQ11 1180 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 C5AR2Q9P296 337 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 CDC23Q9UJX2 597 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 NFS1Q9Y697 457 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 PCSK5Q92824 1860 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 A0A1B0GX78 115 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 TCP11X1B4DZS4 312 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 KPNA5O15131 536 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 CNOT3O75175 753 aaKnown RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 ITGA3P26006 1051 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MGAT1P26572 445 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 FMO4P31512 558 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MRPL49Q13405 166 aaKnown RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 GRB7Q14451 532 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 GRM7Q14831 915 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MYBPC3Q14896 1274 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 PLEKHN1Q494U1 663 aaPredicted RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MRPL14Q6P1L8 145 aaKnown RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 SHISA6Q6ZSJ9 500 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 PPP1R32Q7Z5V6 425 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 SDCCAG8Q86SQ7 713 aaPredicted RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 TMEM151BQ8IW70 566 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 FAM136AQ96C01 138 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MIPEPQ99797 713 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 MENTQ9BUN1 341 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 EIF2B3Q9NR50 452 aaKnown RBP18.66■□□□□ 0.58
ITGA4-202ENST00000339307 CUTCQ9NTM9 273 aa18.66■□□□□ 0.58
ITGA4-202ENST00000339307 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 KRT87PA6NCN2 255 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 GOLGA8KD6RF30 607 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 GOLGA8TH3BQL2 631 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 AP3B1O00203 1094 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 KLHL41O60662 606 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 VAPBO95292 243 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 FGGP02679 453 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 UMODP07911 640 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 VARSP26640 1264 aaKnown RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 KCNJ1P48048 391 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 VSX2P58304 361 aaPredicted RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 CCSMST1Q4G0I0 132 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 C4orf17Q53FE4 359 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 FCRL6Q6DN72 434 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 C4orf22Q6V702 233 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 IQCKQ8N0W5 287 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 ZADH2Q8N4Q0 377 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 CISD2Q8N5K1 135 aaKnown RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 UBE2Q2Q8WVN8 375 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 MAIP1Q8WWC4 291 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 TM9SF4Q92544 642 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 C19orf60Q96EN9 201 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 SOX17Q9H6I2 414 aaPredicted RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 TREX1Q9NSU2 369 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 DRG1Q9Y295 367 aaKnown RBP18.65■□□□□ 0.58
ITGA4-202ENST00000339307 B3GNT3Q9Y2A9 372 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 MRFAP1Q9Y605 127 aa18.65■□□□□ 0.58
ITGA4-202ENST00000339307 FER1L5A0AVI2 2057 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 AGPSO00116 658 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 PFDN6O15212 129 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 CEP104O60308 925 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 ALOX12BO75342 701 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 C1orf105O95561 183 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 EIF2S1P05198 315 aaKnown RBP18.64■□□□□ 0.57
ITGA4-202ENST00000339307 PSMB5P28074 263 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 TSTA3Q13630 321 aaPredicted RBP18.64■□□□□ 0.57
ITGA4-202ENST00000339307 SIX1Q15475 284 aaPredicted RBP18.64■□□□□ 0.57
ITGA4-202ENST00000339307 TRIP13Q15645 432 aaPredicted RBP18.64■□□□□ 0.57
ITGA4-202ENST00000339307 TCTE1Q5JU00 501 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 MRNIPQ6NTE8 343 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 OVCH1Q7RTY7 1134 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 LRRC6Q86X45 466 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 MPP5Q8N3R9 675 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 MAGEC3Q8TD91 643 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 MFSD3Q96ES6 412 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 P2RY12Q9H244 342 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 SLC22A11Q9NSA0 550 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 SYBUQ9NX95 663 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 MAU2Q9Y6X3 613 aa18.64■□□□□ 0.57
ITGA4-202ENST00000339307 SPENQ96T58 3664 aaKnown RBP18.63■□□□□ 0.57
ITGA4-202ENST00000339307 A0A0J9YVX5 310 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 DSCR3O14972 297 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 NRDCO43847 1150 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 SEMA7AO75326 666 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 IPO13O94829 963 aaKnown RBP18.63■□□□□ 0.57
ITGA4-202ENST00000339307 CHRM3P20309 590 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 OR1D4P47884 311 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 GLRBP48167 497 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 VPS41P49754 854 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 WASHC2DQ5SRD0 308 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 IRAK1BP1Q5VVH5 260 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 HIST2H2BCQ6DN03 193 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 SSC4DQ8WTU2 575 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 ZUFSPQ96AP4 578 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 SNRNP40Q96DI7 357 aaKnown RBP18.63■□□□□ 0.57
ITGA4-202ENST00000339307 ZNF552Q9H707 407 aaPredicted RBP18.63■□□□□ 0.57
ITGA4-202ENST00000339307 FBXL4Q9UKA2 621 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 CRYL1Q9Y2S2 319 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 FAM169AQ9Y6X4 670 aa18.63■□□□□ 0.57
ITGA4-202ENST00000339307 RPS3P23396 243 aaKnown RBP eCLIP18.62■□□□□ 0.57
ITGA4-202ENST00000339307 CXCR5P32302 372 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms