RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 OSBPL11Q9BXB4 747 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 NAA50Q9GZZ1 169 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 OR2AG1Q9H205 316 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 NTN4Q9HB63 628 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 FADS3Q9Y5Q0 445 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 LATS1O95835 1130 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 SERPINA1P01009 418 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 FGBP02675 491 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 FESP07332 822 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 NUDT7P0C024 238 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 EEF1B2P24534 225 aaKnown RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 RPS9P46781 194 aaKnown RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 PRMT2P55345 433 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 PFN3P60673 137 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 HKDC1Q2TB90 917 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 USP39Q53GS9 565 aaKnown RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 ZNF621Q6ZSS3 439 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 CFAP206Q8IYR0 622 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MMP21Q8N119 569 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 VN1R2Q8NFZ6 395 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 FRS2Q8WU20 508 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 ZUFSPQ96AP4 578 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 CEP295NLQ96MC4 621 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MUS81Q96NY9 551 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 SORBS1Q9BX66 1292 aaKnown RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 CRISPLD2Q9H0B8 497 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 EBF1Q9UH73 591 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 CDC14AQ9UNH5 594 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MYRFQ9Y2G1 1151 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MITFO75030 526 aaPredicted RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 H6PDO95479 791 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 PTPN2P17706 415 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 TNFRSF1BP20333 461 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 S100A3P33764 101 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 SHMT2P34897 504 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 PIGAP37287 484 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 IRX1P78414 480 aaPredicted RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 CTBSQ01459 385 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 DHCR24Q15392 516 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 ATP6AP1Q15904 470 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 VTCN1Q7Z7D3 282 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 TMPRSS11BQ86T26 416 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 GALNT15Q8N3T1 639 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 ZNF740Q8NDX6 193 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 HIC2Q96JB3 615 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 OR4K3Q96R72 315 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MCCC1Q96RQ3 725 aaPredicted RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 UHRF1Q96T88 793 aaPredicted RBP8.6□□□□□ -1.03
SNCA-201ENST00000336904 EMILIN2Q9BXX0 1053 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 ADNPQ9H2P0 1102 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 IGFLR1Q9H665 355 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 TM7SF3Q9NS93 570 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 WDR87Q6ZQQ6 2873 aa8.6□□□□□ -1.03
SNCA-201ENST00000336904 MAGEB17A8MXT2 336 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 MYO1GB0I1T2 1018 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 H3BNH8 94 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CXCR6O00574 342 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 TULP3O75386 442 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CST1P01037 141 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 KRT6AP02538 564 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 KRT6BP04259 564 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CYP17A1P05093 508 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ANXA6P08133 673 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 EBLN1P0CF75 366 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 JAK1P23458 1154 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 SLC5A2P31639 672 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 PTGER1P34995 402 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 MAPK8P45983 427 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 KRT6CP48668 564 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 DGKGP49619 791 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 RPL26P61254 145 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 VAC14Q08AM6 782 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 GTF2H3Q13889 308 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 DOC2AQ14183 400 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 SYT12Q8IV01 421 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 MMAAQ8IVH4 418 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 SYTL1Q8IYJ3 562 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ZNF548Q8NEK5 533 aaPredicted RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 SPPL3Q8TCT6 385 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 SH3KBP1Q96B97 665 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 FAM120BQ96EK7 910 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 MRPS26Q9BYN8 205 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 REXO4Q9GZR2 422 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 FAM192AQ9GZU8 254 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 VNN3Q9NY84 501 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 IL36AQ9UHA7 158 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 AHCYL1O43865 530 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 E2F6O75461 281 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 GGT1P19440 569 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 EN2P19622 333 aaPredicted RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 MAP4P27816 1152 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 VIPR1P32241 457 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CLCN2P51788 898 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 EEFSECP57772 596 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 MC1RQ01726 317 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 APOFQ13790 326 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ZNF77Q15935 545 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms