RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CENPOQ9BU64 300 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 DERL2Q9GZP9 239 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.03□□□□□ -1.12
HPS4-201ENST00000336873 FAM124BQ9H5Z6 455 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 AASDHPPTQ9NRN7 309 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 OLAHQ9NV23 265 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NLE1Q9NVX2 485 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 C1orf109Q9NX04 203 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 MAGEL2Q9UJ55 1249 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 SNX6Q9UNH7 406 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 DLGAP4Q9Y2H0 992 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 DNMT3AQ9Y6K1 912 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 TET1Q8NFU7 2136 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 FAM234BA2RU67 622 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 SYN3O14994 580 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 VPS4BO75351 444 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NME6O75414 186 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 INMTO95050 263 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 S100A5P33763 92 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 HPCAP84074 193 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 ARF5P84085 180 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 HSPB3Q12988 150 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 DAG1Q14118 895 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 MYBPC3Q14896 1274 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 USP39Q53GS9 565 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 TMEM220Q6QAJ8 160 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 TMC5Q6UXY8 1006 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 DEF8Q6ZN54 512 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NEK10Q6ZWH5 1172 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 SPATA19Q7Z5L4 167 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 FAM217AQ8IXS0 508 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 POC5Q8NA72 575 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NETO1Q8TDF5 533 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 XAGE5Q8WWM1 108 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 TMEM203Q969S6 136 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 ZHX1-C8orf76Q96EF9 292 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 APIPQ96GX9 242 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 PKP4Q99569 1192 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 RIOK2Q9BVS4 552 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 TOR4AQ9NXH8 423 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 TMEM181Q9P2C4 612 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 B4GALT6Q9UBX8 382 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 MYOFQ9NZM1 2061 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NPIPB15A6NHN6 443 aaPredicted RBP8.02□□□□□ -1.12
HPS4-201ENST00000336873 CREG1O75629 220 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 GPIP06744 558 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 ELFN1P0C7U0 828 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 SMIM18P0DKX4 95 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 RAP2AP10114 183 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 BCKDHAP12694 445 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 BPIP17213 487 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 POLR2EP19388 210 aaKnown RBP8.02□□□□□ -1.12
HPS4-201ENST00000336873 TNNI3P19429 210 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 RFC2P35250 354 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 INPP1P49441 399 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 MRPS15P82914 257 aaKnown RBP8.02□□□□□ -1.12
HPS4-201ENST00000336873 EPS8Q12929 822 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 HERC3Q15034 1050 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 ADGRG6Q86SQ4 1221 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 FAM124AQ86V42 546 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 TMEM25Q86YD3 366 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 FAM20CQ8IXL6 584 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 ADGRG5Q8IZF4 528 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 ZNF461Q8TAF7 563 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 TMEM125Q96AQ2 219 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 PPP1R14BQ96C90 147 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 AP2M1Q96CW1 435 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 C1orf74Q96LT6 269 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 FAM83DQ9H4H8 585 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 PALMDQ9NP74 551 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 SDR39U1Q9NRG7 319 aaPredicted RBP8.02□□□□□ -1.12
HPS4-201ENST00000336873 HSFX1Q9UBD0 423 aa8.02□□□□□ -1.12
HPS4-201ENST00000336873 LOXHD1Q8IVV2 1947 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 A8MU76 341 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 TARM1B6A8C7 271 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 WASH3PC4AMC7 463 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 TBX1O43435 398 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 DENRO43583 198 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 MFN2O95140 757 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 OAZ2O95190 189 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 GPR1P46091 355 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 ST13P50502 369 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 CNTN1Q12860 1018 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 ADNP2Q6IQ32 1131 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 GPR26Q8NDV2 337 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 RAB8BQ92930 207 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 EXOSC8Q96B26 276 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 OR2AG1Q9H205 316 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 INTS10Q9NVR2 710 aaKnown RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 AIG1Q9NVV5 245 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 USE1Q9NZ43 259 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CXXC1Q9P0U4 656 aaPredicted RBP8.02□□□□□ -1.13
HPS4-201ENST00000336873 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 PCDHGA8Q9Y5G5 932 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 CKAP5Q14008 2032 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 ILVBLA1L0T0 632 aa8.02□□□□□ -1.13
HPS4-201ENST00000336873 AQP12BA6NM10 295 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms