RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PRDM8Q9NQV8 689 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CCM2LQ9NUG4 571 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM248Q9NWD8 314 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 KCTD5Q9NXV2 234 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SLAMF8Q9P0V8 285 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 B4GALT6Q9UBX8 382 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 NDOR1Q9UHB4 597 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 KRT87PA6NCN2 255 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SLC9A3R1O14745 358 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 MMP20O60882 483 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ADAM23O75077 832 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 VPS4BO75351 444 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OPN1SWP03999 348 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SLC35G4P0C7Q5 338 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 UROSP10746 265 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 AGXTP21549 392 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ALDH3B2P48448 385 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 FOXA1P55317 472 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 AP1S1P61966 158 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PTCHD3Q3KNS1 767 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 THOC7Q6I9Y2 204 aaKnown RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TYW3Q6IPR3 259 aaKnown RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 BORAQ6PGQ7 559 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ARHGAP12Q8IWW6 846 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SLC22A15Q8IZD6 547 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 UMODL1-AS1Q8N2C9 162 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OR9Q1Q8NGQ5 310 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 VANGL1Q8TAA9 524 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CNIH3Q8TBE1 160 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 FAR1Q8WVX9 515 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CLP1Q92989 425 aaKnown RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ACDQ96AP0 544 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PSKH2Q96QS6 385 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 FUNDC2Q9BWH2 189 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM98Q9Y2Y6 226 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CAB39Q9Y376 341 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 EP300Q09472 2414 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 GSAPA4D1B5 854 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SERPINB7O75635 380 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OAZ2O95190 189 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ANXA6P08133 673 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 GABRB3P28472 473 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PRDX3P30048 256 aaKnown RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 NSG1P42857 185 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CENPAP49450 140 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OR4D2P58180 307 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SH3BP2P78314 561 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 FAM189BP81408 668 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 C2orf80Q0P641 193 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 MTA1Q13330 715 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 LRP8Q14114 963 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PLEKHG6Q3KR16 790 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CYP27C1Q4G0S4 372 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 NHSL2Q5HYW2 709 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TXNDC11Q6PKC3 985 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 RTN4RL1Q86UN2 441 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OOSP2Q86WS3 158 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 RGL4Q8IZJ4 473 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OR5AK3PQ8NH89 298 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CSGALNACT1Q8TDX6 532 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 UBASH3BQ8TF42 649 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ZFP90Q8TF47 636 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 NUDT8Q8WV74 236 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 EXOSC8Q96B26 276 aaKnown RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 SLCO4A1Q96BD0 722 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 IL12RB2Q99665 862 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PRRG3Q9BZD7 231 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TPK1Q9H3S4 243 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 TNFRSF12AQ9NP84 129 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 INIPQ9NRY2 104 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 DNAJC11Q9NVH1 559 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 CMTM6Q9NX76 183 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 H2AFY2Q9P0M6 372 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-201ENST00000336216 OGDHLQ9ULD0 1010 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 GMPPBQ9Y5P6 360 aa6.33□□□□□ -1.4
HMG20A-201ENST00000336216 PARP14Q460N5 1801 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 RLFQ13129 1914 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CCDC85CA6NKD9 419 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 AQP12BA6NM10 295 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 HAS3O00219 553 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 LATO43561 262 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PAK4O96013 591 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 GPIP06744 558 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PTNP21246 168 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 PAX3P23760 479 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 GTF2E2P29084 291 aaKnown RBP6.32□□□□□ -1.4
HMG20A-201ENST00000336216 SLC6A4P31645 630 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CD70P32970 193 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 HNF1BP35680 557 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 ETV3P41162 512 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 MAGEA3P43357 314 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DEFA1P59665 94 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 DEFA3P59666 94 aa6.32□□□□□ -1.4
HMG20A-201ENST00000336216 CAP1Q01518 475 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms