RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SDR16C5Q8N3Y7 309 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 CLDN19Q8N6F1 224 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 SGF29Q96ES7 293 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 TMEM237Q96Q45 408 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 TRIM54Q9BYV2 358 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 ZFP69BQ9UJL9 534 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 KCNK6Q9Y257 313 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 OARD1Q9Y530 152 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 PRSS21Q9Y6M0 314 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 RNF215Q9Y6U7 377 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 KIF26BQ2KJY2 2108 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 SUPT3HB4E1H0 165 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CHUKO15111 745 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 SUPT3HO75486 399 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ACP5P13686 325 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 JUPP14923 745 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ACTR1BP42025 376 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 KCNC1P48547 511 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 DUSP3P51452 185 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ACTR1AP61163 376 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ILF3Q12906 894 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 BNIP1Q12981 228 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 KRT72Q14CN4 511 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 TSNQ15631 228 aaKnown RBP15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 BCL7AQ4VC05 210 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CDCP2Q5VXM1 449 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CRTC3Q6UUV7 619 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 TMPRSS12Q86WS5 348 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 GALNT13Q8IUC8 556 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 TCAIMQ8N3R3 496 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 PTGR2Q8N8N7 351 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 PDPRQ8NCN5 879 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ZDHHC1Q8WTX9 485 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CCDC74AQ96AQ1 378 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 PHF21BQ96EK2 531 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 RILPQ96NA2 401 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 SLC30A3Q99726 388 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CCT7Q99832 543 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 CCDC28BQ9BUN5 200 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 GSDMCQ9BYG8 508 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 GALPQ9UBC7 116 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 TBC1D29Q9UFV1 150 aa15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 COL27A1Q8IZC6 1860 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1-201ENST00000329399 C17orf113A0A1B0GUU1 675 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 A0A1W2PNU3 283 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 A0A1W2PQM1 296 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PABPN1LA6NDY0 278 aaKnown RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 TRABD2BA6NFA1 517 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 IQCF5A8MTL0 148 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CDC7O00311 574 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 SLC22A2O15244 555 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 GRID2O43424 1007 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 SUPT7LO94864 414 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 MT-CO3P00414 261 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 GP1BAP07359 652 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 KITP10721 976 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 ADSLP30566 484 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PRLHRP49683 370 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CTSCP53634 463 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CCL7P80098 99 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 TMEM115Q12893 351 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 GTF2H3Q13889 308 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PCBP2Q15366 365 aaKnown RBP eCLIP15.98■□□□□ 0.153e-24■■□□□ 13.3
PDLIM1-201ENST00000329399 TGFBIQ15582 683 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PFKFB4Q16877 469 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PLA2G4EQ3MJ16 856 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 SULT1C3Q6IMI6 304 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 ACAD11Q709F0 780 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CLNKQ7Z7G1 428 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 C11orf96Q7Z7L8 435 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 LSMEM2Q8N112 164 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 ZNF781Q8N8C0 355 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 RASGEF1AQ8N9B8 481 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 Q8N9G6 341 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 MAPK15Q8TD08 544 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CCDC3Q9BQI4 270 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CCM2Q9BSQ5 444 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 MYLK2Q9H1R3 596 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 GSTO2Q9H4Y5 243 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 ZNF395Q9H8N7 513 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 PNPOQ9NVS9 261 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 CD274Q9NZQ7 290 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 SLC12A4Q9UP95 1085 aa15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 DNMT3AQ9Y6K1 912 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 ZFC3H1O60293 1989 aaKnown RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 KMT2BQ9UMN6 2715 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1-201ENST00000329399 NPEPPSL1A6NEC2 478 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PRR19A6NJB7 356 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UBXN8O00124 270 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ZNF195O14628 629 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PPM1DO15297 605 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CDK14O94921 469 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SLCO2B1O94956 709 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 VCLP18206 1134 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ARRB2P32121 409 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PIK3CGP48736 1102 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 AP1S2P56377 157 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CORO7P57737 925 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms