RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 EPORP19235 508 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 RPL14P50914 215 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 GABPB1Q06547 395 aaPredicted RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 CDC16Q13042 620 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 FASTKQ14296 549 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 LPAL2Q16609 132 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SH2D4BQ5SQS7 431 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 MAPK15Q8TD08 544 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SMPDL3AQ92484 453 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SIKE1Q9BRV8 207 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC40A1Q9NP59 571 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 TNFRSF12AQ9NP84 129 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 PNPOQ9NVS9 261 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 GPRC5BQ9NZH0 403 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 ZDHHC2Q9UIJ5 367 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 RAB23Q9ULC3 237 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 TRBV23OR9-2A0A075B6M9 112 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 ESRRBO95718 433 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SHMT2P34897 504 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 MPLP40238 635 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 CCNG1P51959 295 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SH3BP2P78314 561 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 DEFB133Q30KQ1 61 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 TRIM61Q5EBN2 209 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SPATA21Q7Z572 469 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SYVN1Q86TM6 617 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 C17orf82Q86X59 251 aaPredicted RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 SFTPA2Q8IWL1 248 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 AFAP1L2Q8N4X5 818 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 OR52B6Q8NGF0 335 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF473Q8WTR7 871 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 FAR2Q96K12 515 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 OR4K3Q96R72 315 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 NTMT1Q9BV86 223 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 NPHS2Q9NP85 383 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 A0A1B0GTL3 188 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PATE3B3GLJ2 98 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 SLCO1B7G3V0H7 640 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 GIPC1O14908 333 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 NOBOXO60393 691 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 FGF4P08620 206 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 KITP10721 976 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ALOX15P16050 662 aaPredicted RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PRDX3P30048 256 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PCDH1Q08174 1060 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 GPR18Q14330 331 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 HLA-BQ31612 363 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PRAMEF13Q5VWM6 474 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 KANK2Q63ZY3 851 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 LAIR1Q6GTX8 287 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 OGFOD3Q6PK18 319 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 LCTLQ6UWM7 567 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 KANSL1Q7Z3B3 1105 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PIGWQ7Z7B1 504 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 WDR75Q8IWA0 830 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 LINC01555Q8NAE3 123 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 AGR3Q8TD06 166 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 BCAS4Q8TDM0 211 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 LCN9Q8WX39 176 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ATP6V1E2Q96A05 226 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 NRTNQ99748 197 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 MIPEPQ99797 713 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ELAC2Q9BQ52 826 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PCBD2Q9H0N5 130 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 STN1Q9H668 368 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 XKR8Q9H6D3 395 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 FSCN3Q9NQT6 498 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 KLHL14Q9P2G3 628 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 VTI1BQ9UEU0 232 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 TRPS1Q9UHF7 1281 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF225Q9UK10 706 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 DYRK1BQ9Y463 629 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 CACNA1HO95180 2353 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 A0A1W2PPV9 198 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 FAM221BA6H8Z2 402 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 TMEM233B4DJY2 109 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 NDUFAB1O14561 156 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 AZIN1O14977 448 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 SNX3O60493 162 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 CER1O95813 267 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ENO1P06733 434 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 EBLN1P0CF75 366 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 FASLGP48023 281 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ERVPABLB-1P60509 514 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 HHEXQ03014 270 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 BNIP3Q12983 259 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 TERF2Q15554 542 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 SUSD1Q6UWL2 747 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 AMIGO1Q86WK6 493 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC25A45Q8N413 288 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 CHCHD4Q8N4Q1 142 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 LMNTD1Q8N9Z9 388 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 OR4F6Q8NGB9 312 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms