RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ENTPD4Q9Y227 616 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CAPN14A8MX76 684 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 PCDH7O60245 1069 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 OR10H3O60404 316 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 SLC16A8O95907 504 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 SOX9P48436 509 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 GANABQ14697 944 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 LIN52Q52LA3 116 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 PAGE3Q5JUK9 113 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ABRAXAS1Q6UWZ7 409 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 LKAAEAR1Q8TD35 194 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RORBQ92753 470 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 GTPBP3Q969Y2 492 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 NR1H4Q96RI1 486 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ADI1Q9BV57 179 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 SMURF2Q9HAU4 748 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 MAGEL2Q9UJ55 1249 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 C3orf18Q9UK00 162 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 DOCK1Q14185 1865 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 MAGEB17A8MXT2 336 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CLIC1O00299 241 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SLC28A2O43868 658 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 C8orf89P0DMQ9 161 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CEBPBP17676 345 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 MAGP20916 626 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 HTR1BP28222 390 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 VIPR1P32241 457 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 FBXW4P57775 412 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 DNAJB13P59910 316 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 TRIM71Q2Q1W2 868 aaKnown RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 PRAMEF14Q5SWL7 426 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 TYW3Q6IPR3 259 aaKnown RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 ENPP7Q6UWV6 458 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 GALNT13Q8IUC8 556 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 KCNN1Q92952 543 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SCRN2Q96FV2 425 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 TNFRSF12AQ9NP84 129 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 IL23AQ9NPF7 189 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 KRT84Q9NSB2 600 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 C5AR2Q9P296 337 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 KLHL20Q9Y2M5 609 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 PCDHGA11Q9Y5H2 935 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 LYVE1Q9Y5Y7 322 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 QSOX1O00391 747 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SNUPNO95149 360 aaKnown RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 PDYNP01213 254 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 C8GP07360 202 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SLC6A11P48066 632 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 OR4D2P58180 307 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 RHDQ02161 417 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 DYNC1I2Q13409 638 aaKnown RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CXorf57Q6NSI4 855 aaKnown RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 HEATR4Q86WZ0 1026 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 OR9Q1Q8NGQ5 310 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 ROPN1LQ96C74 230 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CENPNQ96H22 339 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 DUSP26Q9BV47 211 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 C1orf21Q9H246 121 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 USE1Q9NZ43 259 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 H2AFY2Q9P0M6 372 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 GULP1Q9UBP9 304 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 PCTPQ9UKL6 214 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF451Q9Y4E5 1061 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 IGLON5A6NGN9 336 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 ENGP17813 658 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SPINT3P49223 89 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 RNF144AP50876 292 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CTSCP53634 463 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CD300LGQ6UXG3 332 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 BHLHA9Q7RTU4 235 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 HSD11B1LQ7Z5J1 315 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 ZDHHC21Q8IVQ6 265 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 FIBINQ8TAL6 211 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 LCN9Q8WX39 176 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SLC9A6Q92581 669 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 LMLNQ96KR4 655 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 VPS35Q96QK1 796 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 SIPA1L1O43166 1804 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-201ENST00000321105 CACNA1EQ15878 2313 aa10.72□□□□□ -0.69
TOP3A-201ENST00000321105 UBFD1O14562 309 aaKnown RBP10.71□□□□□ -0.69
TOP3A-201ENST00000321105 ZW10O43264 779 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 IDSP22304 550 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 OR1E2P47887 323 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 CENPAP49450 140 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF140P52738 457 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-201ENST00000321105 CDH12P55289 794 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 USP39Q53GS9 565 aaKnown RBP10.71□□□□□ -0.69
TOP3A-201ENST00000321105 GATAD2AQ86YP4 633 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 SFRP1Q8N474 314 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 SPACA7Q96KW9 195 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 MACROD1Q9BQ69 325 aa10.71□□□□□ -0.69
TOP3A-201ENST00000321105 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
TOP3A-201ENST00000321105 C6orf62Q9GZU0 229 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms