RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLC2A4P14672 509 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 POLR2CP19387 275 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 IMPDH1P20839 514 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 PRDX3P30048 256 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 RAB28P51157 221 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 GNGT1P63211 74 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 PDK4Q16654 411 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 AMZ1Q400G9 498 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 AASDHQ4L235 1098 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 UNC50Q53HI1 259 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 CCDC157Q569K6 752 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 KANSL1Q7Z3B3 1105 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 GOLGA7Q7Z5G4 137 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ARL10Q8N8L6 244 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 SREK1Q8WXA9 508 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 RSC1A1Q92681 617 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ATP6V1E2Q96A05 226 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 CAPS2Q9BXY5 557 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 STN1Q9H668 368 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 NOL11Q9H8H0 719 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ZBTB26Q9HCK0 441 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 PRM3Q9NNZ6 103 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 POLG2Q9UHN1 485 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 PCTPQ9UKL6 214 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 KLHL20Q9Y2M5 609 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ARID1BQ8NFD5 2236 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 OR5K4A6NMS3 321 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 BTN3A3O00478 584 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 CLGNO14967 610 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 BIRC5O15392 142 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 KLK8O60259 260 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ALPPL2P10696 532 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 NFKB2Q00653 900 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 STX3Q13277 289 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 GUSBP11Q6P575 273 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 THOC6Q86W42 341 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 GPR156Q8NFN8 814 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 CKAP2Q8WWK9 683 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 FBXL8Q96CD0 374 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 PPM1MQ96MI6 270 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 OR4K3Q96R72 315 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 GSTO2Q9H4Y5 243 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ISM1B1AKI9 464 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 TMEM233B4DJY2 109 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 CDX4O14627 284 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 NRP2O60462 931 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 HSPA4LO95757 839 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 MPSTP25325 297 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 NBL1P41271 181 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC1A6P48664 564 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 HNMTP50135 292 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 SEC24CP53992 1094 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 MEF2AQ02078 507 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 GTF2H2Q13888 395 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 ARL13AQ5H913 290 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 ANKS6Q68DC2 871 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 ZCCHC8Q6NZY4 707 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 GTF2H2CQ6P1K8 395 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 TMEM26Q6ZUK4 368 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 TRIM73Q86UV7 250 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 RAB42Q8N4Z0 105 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 OR4C6Q8NH72 309 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 CCDC126Q96EE4 140 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 PPP1R36Q96LQ0 422 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 MIPEPQ99797 713 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 IPPKQ9H8X2 491 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 TNFRSF12AQ9NP84 129 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 KLHL3Q9UH77 587 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 ADAM21Q9UKJ8 722 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 HCN4Q9Y3Q4 1203 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 CSNK1G3Q9Y6M4 447 aa14.9□□□□□ -0.02
PDLIM5-202ENST00000318007 E7EQ34 232 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 STX16-NPEPL1H3BU86 382 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 UBFD1O14562 309 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 STX16O14662 325 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 SERPINE1P05121 402 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 RPS17P08708 135 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 NDUFS1P28331 727 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 PEBP1P30086 187 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 PKLRP30613 574 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 PIK3CGP48736 1102 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 OR1D5P58170 312 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CBX1P83916 185 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CDKL1Q00532 357 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CLCQ05315 142 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 FBXO15Q8NCQ5 510 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 MAGEB18Q96M61 343 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF292O60281 2723 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 C4orf47A7E2U8 309 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 K7EPI3 171 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 DFNA5O60443 496 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 EPB42P16452 691 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 AMD1P17707 334 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 SLC6A12P48065 614 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 DAB2P98082 770 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms