RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GFAPP14136 432 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NCF1P14598 390 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 M6PRP20645 277 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 EEF1DP29692 281 aaKnown RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 HPCAL1P37235 193 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 OPRD1P41143 372 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NME5P56597 212 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 RHDQ02161 417 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 GPRC6AQ5T6X5 926 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ANKRD54Q6NXT1 300 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 SBSNQ6UWP8 590 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZC3H7AQ8IWR0 971 aaKnown RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 FAM20CQ8IXL6 584 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 FBXO39Q8N4B4 442 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 RAB2BQ8WUD1 216 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ESAMQ96AP7 390 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 FAR2Q96K12 515 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 MARK4Q96L34 752 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZBTB26Q9HCK0 441 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CLDND1Q9NY35 253 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 OBP2AQ9NY56 170 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZDHHC3Q9NYG2 299 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ANGPTL3Q9Y5C1 460 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 A0A1W2PQ67 120 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 C16orf96A6NNT2 1141 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CXCR2P25025 360 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 MAP4P27816 1152 aaKnown RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NNMTP40261 264 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NUDT2P50583 147 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 PPP1R3AQ16821 1122 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 C18orf21Q32NC0 220 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF805Q5CZA5 627 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 LYPLAL1Q5VWZ2 237 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 TMCO5AQ8N6Q1 288 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 GOLM1Q8NBJ4 401 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 VMP1Q96GC9 406 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 TRMOQ9BU70 441 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 EFHD1Q9BUP0 239 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 C1QTNF3Q9BXJ4 246 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 TP63Q9H3D4 680 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 MARCH7Q9H992 704 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 MEAF6Q9HAF1 191 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CPNE5Q9HCH3 593 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZDHHC4Q9NPG8 344 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF225Q9UK10 706 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CDYLQ9Y232 598 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 DYTNA2CJ06 578 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 TRIM16O95361 564 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 PRDX3P30048 256 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 SLC7A1P30825 629 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 IDUAP35475 653 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 ETV3P41162 512 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 TPTEP56180 551 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 OCA2Q04671 838 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 FCHO2Q0JRZ9 810 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 TRAP1Q12931 704 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 LRP8Q14114 963 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 UGT3A1Q6NUS8 523 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 PRR23CQ6ZRP0 262 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 Q6ZVL8 140 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 DPPA4Q7L190 304 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 PELI3Q8N2H9 469 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 SNX31Q8N9S9 440 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 C3orf30Q96M34 536 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 KCNA7Q96RP8 456 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 AKIP1Q9NQ31 210 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 C8orf4Q9NR00 106 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 DEC1Q9P2X7 70 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 PCTPQ9UKL6 214 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 TMA7Q9Y2S6 64 aaKnown RBP12.73□□□□□ -0.37
CPNE1-201ENST00000317677 PTGDR2Q9Y5Y4 395 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 XIRP2A4UGR9 3374 aa12.73□□□□□ -0.37
CPNE1-201ENST00000317677 FADS2P1A8MWK0 482 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 STX16-NPEPL1H3BU86 382 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PSMD11O00231 422 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PLK4O00444 970 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TRIM38O00635 465 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 STX16O14662 325 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 AIM2O14862 343 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 SGTAO43765 313 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 SEC14L2O76054 403 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CRYZL1O95825 349 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF30P17039 623 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PIK3R1P27986 724 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 MMP12P39900 470 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CLCQ05315 142 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 DLX2Q07687 328 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms