RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 ZNF185O15231 689 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 KLHL41O60662 606 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 SRPX2O60687 465 aaPredicted RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 KLF7O75840 302 aaPredicted RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 CEACAM4O75871 244 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 OTX2P32243 289 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 GRM7Q14831 915 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 NAA25Q14CX7 972 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 FAM214AQ32MH5 1076 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 ANKRD20A4Q4UJ75 823 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 FAM69BQ5VUD6 431 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 CILP2Q8IUL8 1156 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 LMNTD1Q8N9Z9 388 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 HMGCLL1Q8TB92 370 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 GRK7Q8WTQ7 553 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 MS4A14Q96JA4 679 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 CCDC68Q9H2F9 335 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 SPATA7Q9P0W8 599 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
TPM1-203ENST00000317516 ASH1LQ9NR48 2969 aaKnown RBP17.06■□□□□ 0.32
TPM1-203ENST00000317516 SEC16AO15027 2179 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 CTAGE9A4FU28 777 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 TTLL8A6PVC2 850 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 ZSCAN12O43309 604 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
TPM1-203ENST00000317516 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 MATN4O95460 622 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 PDGFAP04085 211 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 BDKRB1P46663 353 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 CYP1B1Q16678 543 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 TTLL9Q3SXZ7 439 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 ANKRD22Q5VYY1 191 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 TTLL10Q6ZVT0 673 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 TTC29Q8NA56 475 aaPredicted RBP17.05■□□□□ 0.32
TPM1-203ENST00000317516 OR2Y1Q8NGV0 311 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 NACC2Q96BF6 587 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 SELENOSQ9BQE4 189 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 FAM114A2Q9NRY5 505 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 GPR83Q9NYM4 423 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 IL1RAPL1Q9NZN1 696 aa17.05■□□□□ 0.32
TPM1-203ENST00000317516 A0A1B0GX78 115 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 A6NL46 340 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 DPM1O60762 260 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ALBP02768 609 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 CTSBP07858 339 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 SPTBP11277 2137 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 HSD17B2P37059 387 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 GRIA3P42263 894 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ATP1A4Q13733 1029 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 FCRL6Q6DN72 434 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ZNF470Q6ECI4 717 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 MRPL14Q6P1L8 145 aaKnown RBP17.04■□□□□ 0.32
TPM1-203ENST00000317516 CENPUQ71F23 418 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 LMNTD2Q8IXW0 634 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 EFCAB3Q8N7B9 438 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 CLEC1AQ8NC01 280 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 FDCSPQ8NFU4 85 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 OR9A1PQ8NGU1 263 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 CALML6Q8TD86 181 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ZNF669Q96BR6 464 aaPredicted RBP17.04■□□□□ 0.32
TPM1-203ENST00000317516 SERPINB12Q96P63 405 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 KLHL42Q9P2K6 505 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 KLK4Q9Y5K2 254 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 FAM169AQ9Y6X4 670 aa17.04■□□□□ 0.32
TPM1-203ENST00000317516 ZNF839A8K0R7 811 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 GOLGA8MH3BSY2 632 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 CATP04040 527 aaKnown RBP17.03■□□□□ 0.32
TPM1-203ENST00000317516 CMPK1P30085 196 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 FNTAP49354 379 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 MLLT10P55197 1068 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 GBX1Q14549 363 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 ARHGAP19Q14CB8 494 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 CYP2A13Q16696 494 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 KCTD19Q17RG1 926 aaPredicted RBP17.03■□□□□ 0.32
TPM1-203ENST00000317516 OVCH1Q7RTY7 1134 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 MRGPREQ86SM8 312 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 OR2L3Q8NG85 312 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 MIB2Q96AX9 1013 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 FKBP10Q96AY3 582 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 MIPEPQ99797 713 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 ENAMQ9NRM1 1142 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 CUTCQ9NTM9 273 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 UTP6Q9NYH9 597 aaKnown RBP17.03■□□□□ 0.32
TPM1-203ENST00000317516 RUVBL2Q9Y230 463 aaKnown RBP17.03■□□□□ 0.32
TPM1-203ENST00000317516 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 MAD1L1Q9Y6D9 718 aa17.03■□□□□ 0.32
TPM1-203ENST00000317516 SETXQ7Z333 2677 aaKnown RBP17.02■□□□□ 0.32
TPM1-203ENST00000317516 DSCR3O14972 297 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 KIF5CO60282 957 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms