RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MANEALQ5VSG8 457 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 GPR139Q6DWJ6 353 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 LCN8Q6JVE9 175 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TAF2Q6P1X5 1199 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 USP45Q70EL2 814 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TRILQ7L0X0 811 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 C10orf107Q8IVU9 208 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SLC44A2Q8IWA5 706 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RBFAQ8N0V3 343 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 OR8H2Q8N162 312 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CHDHQ8NE62 594 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 GPR156Q8NFN8 814 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SETD7Q8WTS6 366 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ASZ1Q8WWH4 475 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SLC13A3Q8WWT9 602 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RXFP2Q8WXD0 754 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 GTF3AQ92664 365 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TCEAL3Q969E4 200 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 HDAC10Q969S8 669 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CERS2Q96G23 380 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 HYLS1Q96M11 299 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CSPG4P5Q96PW8 444 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 NPY6RQ99463 290 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SNRNP25Q9BV90 132 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PAPOLGQ9BWT3 736 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 NXF2Q9GZY0 626 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RHOJQ9H4E5 214 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 KAT8Q9H7Z6 458 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ZDHHC4Q9NPG8 344 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TLR9Q9NR96 1032 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RAB6BQ9NRW1 208 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 NDUFAF1Q9Y375 327 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PCDHGB1Q9Y5G3 927 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 EFCAB10A6NFE3 127 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 G3V3G9 751 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 WNT10BO00744 389 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 NEMP1O14524 444 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 HRO43593 1189 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PMPCBO75439 489 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RFPL3O75679 317 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 APBB3O95704 486 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TSPAN12O95859 305 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 HPRP00739 348 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PLATP00750 562 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 MMP10P09238 476 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RPS3P23396 243 aaKnown RBP eCLIP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CHMP24386 653 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CYP2F1P24903 491 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ATP5C1P36542 298 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CLCNKAP51800 687 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CDH8P55286 799 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ACVR1Q04771 509 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM132BQ14DG7 1078 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ZIK1Q3SY52 487 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 GPR33Q49SQ1 333 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SAMD4BQ5PRF9 694 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 DCAF8Q5TAQ9 597 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 N4BP2L1Q5TBK1 243 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 OTUD1Q5VV17 481 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TOP6BLQ8N6T0 577 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 AMER2Q8N7J2 671 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 USP7Q93009 1102 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 AP2M1Q96CW1 435 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ART5Q96L15 291 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 HS6ST2Q96MM7 605 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 GPR78Q96P69 363 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 FAM129BQ96TA1 746 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ZBTB18Q99592 522 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TNKS2Q9H2K2 1166 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 WDR55Q9H6Y2 383 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RPF1Q9H9Y2 349 aaKnown RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 MYOZ2Q9NPC6 264 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SPAG4Q9NPE6 437 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CHRAC1Q9NRG0 131 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 INVSQ9Y283 1065 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 VPS9D1Q9Y2B5 631 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PCDHB3Q9Y5E6 796 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PEX16Q9Y5Y5 336 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 KCNMB2Q9Y691 235 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 A0A0B4J293 547 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 LOC390937A0A1W2PQ73 354 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 C2orf74A8MZ97 194 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 E9PQ18 207 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 IFRD1O00458 451 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 GRID2O43424 1007 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SIGLEC6O43699 453 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 VPS4BO75351 444 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SOAT2O75908 522 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TGM6O95932 706 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 IGLV3-25P01717 112 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CHRM5P08912 532 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 GMPRP36959 345 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MATKP42679 507 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CDH6P55285 790 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 HERVK_113P63132 956 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FADDQ13158 208 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms