RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TRIM39Q9HCM9 518 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SCHIP1Q9P0W5 487 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 BTBD3Q9Y2F9 522 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 TTC28Q96AY4 2481 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 A0A0G2JN53 185 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 FEZF1A0PJY2 475 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 FAM149AA5PLN7 773 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 WASHC1A8K0Z3 465 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 VGLL3A8MV65 326 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ACOT8O14734 319 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PSIP1O75475 530 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SLC22A3O75751 556 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CLDN9O95484 217 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ATP6V1B2P21281 511 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SLC6A2P23975 617 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 OXTRP30559 389 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PTGER1P34995 402 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CLCNKAP51800 687 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ELP6Q0PNE2 266 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SLC14A1Q13336 389 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 WASH2PQ6VEQ5 465 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 NET1Q7Z628 596 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 GALNT10Q86SR1 603 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SLC15A3Q8IY34 581 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PGAM4Q8N0Y7 254 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 AFAP1L2Q8N4X5 818 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 MCOLN3Q8TDD5 553 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PDXPQ96GD0 296 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 TMEM121BQ9BXQ6 578 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 MMADHCQ9H3L0 296 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 FGF22Q9HCT0 170 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PRDM8Q9NQV8 689 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CUEDC1Q9NWM3 386 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 VPS4AQ9UN37 437 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SPTBP11277 2137 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 DFNA5O60443 496 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 WFS1O76024 890 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CHEK2O96017 543 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 FTH1P02794 183 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 GSTM1P09488 218 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ATXN8OSP0DMR3 200 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PCNAP12004 261 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 MAP4P27816 1152 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 IGFALSP35858 605 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 HNF4AP41235 474 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CDKN2CP42773 168 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 POLR2JP52435 117 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ERVK-8P63133 956 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 GSTM4Q03013 218 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 KIAA0040Q15053 153 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PRAMEF14Q5SWL7 426 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PLEKHS1Q5SXH7 462 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 SPATA24Q86W54 205 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ENDOVQ8N8Q3 282 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PATE1Q8WXA2 126 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 TSACCQ96A04 125 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 INPP5KQ9BT40 448 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 ELOVL6Q9H5J4 265 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 DCLRE1BQ9H816 532 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 COPS7BQ9H9Q2 264 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 OBP2AQ9NY56 170 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 PPT2Q9UMR5 302 aa6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 TNPO3Q9Y5L0 923 aaKnown RBP6.79□□□□□ -1.32
LYSMD3-201ENST00000315948 CKAP5Q14008 2032 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 ARHGEF17Q96PE2 2063 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 H0Y858 1186 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 RTCAO00442 366 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 ANGPT2O15123 496 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 BCKDHAP12694 445 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 NTSR1P30989 418 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 IRF8Q02556 426 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 ENPP2Q13822 863 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 RCAN2Q14206 197 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 MLF2Q15773 248 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 IMPG1Q17R60 797 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 TMEM52BQ4KMG9 183 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 LRRC74BQ6ZQY2 392 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 OR7A2PQ8NGA2 310 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 RIPOR3Q96MK2 946 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 OR52A5Q9H2C5 316 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 OR51B5Q9H339 312 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 S100A14Q9HCY8 104 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 IMP3Q9NV31 184 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 VAPAQ9P0L0 249 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 EBF1Q9UH73 591 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 UTS2RQ9UKP6 389 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 C15orf41Q9Y2V0 281 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 NDUFAF1Q9Y375 327 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 DGKBQ9Y6T7 804 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 TDRD6O60522 2096 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 CXorf51AA0A1B0GTR3 108 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 KANSL1LA0AUZ9 987 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
LYSMD3-201ENST00000315948 ANHXE9PGG2 379 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms