RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GPR87Q9BY21 358 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 ADNPQ9H2P0 1102 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 FANCEQ9HB96 536 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 SLC22A11Q9NSA0 550 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 TSR3Q9UJK0 312 aaKnown RBP14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 TUBD1Q9UJT1 453 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 TEX264Q9Y6I9 313 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 IGKV1-8A0A0C4DH67 115 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 CTAGE9A4FU28 777 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 GFYI3L273 518 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 K7EM74 188 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 KLF7O75840 302 aaPredicted RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 CHRM3P20309 590 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 CYP2A7P20853 494 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 CCNFP41002 786 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 GRIA3P42263 894 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 KCNAB2Q13303 367 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 THOC5Q13769 683 aaKnown RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 TRMT10BQ6PF06 316 aaKnown RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 NEK10Q6ZWH5 1172 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 SYVN1Q86TM6 617 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 FBXO15Q8NCQ5 510 aaPredicted RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 OR2L3Q8NG85 312 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 DLG3Q92796 817 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 MR1Q95460 341 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 GPR21Q99679 349 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 RAB11FIP5Q9BXF6 653 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 FAM117AQ9C073 453 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 SLC25A18Q9H1K4 315 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 SLC6A20Q9NP91 592 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 IARS2Q9NSE4 1012 aaKnown RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 EURLQ9NYK6 297 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 FARSAQ9Y285 508 aaKnown RBP14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 VPS9D1Q9Y2B5 631 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
PPP1CA-201ENST00000312989 E7ESA3 106 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 CCDC188H7C350 402 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ZSCAN9O15535 394 aaPredicted RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 KDM1AO60341 852 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 OR2B3O76000 313 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 MED26O95402 600 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 TSPAN12O95859 305 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 AHSGP02765 367 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ELK3P41970 407 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 CCR10P46092 362 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ITGA8P53708 1063 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 MRPS25P82663 173 aaKnown RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 NFATC3Q12968 1075 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 FASTKD3Q14CZ7 662 aaKnown RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 SPANXN3Q5MJ09 141 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 RBM20Q5T481 1227 aaKnown RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 PCGF5Q86SE9 256 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 CPNE9Q8IYJ1 553 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ENDOVQ8N8Q3 282 aaKnown RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 OR9A1PQ8NGU1 263 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 APOBEC4Q8WW27 367 aaKnown RBP14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ASB11Q8WXH4 323 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 SLC22A18Q96BI1 424 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 CERS2Q96G23 380 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 PKP4Q99569 1192 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 NDNQ99608 321 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 ARHGAP9Q9BRR9 750 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 NLNQ9BYT8 704 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 TRIM55Q9BYV6 548 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 TCFL5Q9UL49 500 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 SLC39A10Q9ULF5 831 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 PLCL2Q9UPR0 1127 aa14.02□□□□□ -0.17
PPP1CA-201ENST00000312989 CDC14CA4D256 554 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 OR2A25A4D2G3 310 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 PFDN6O15212 129 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 TTC4O95801 387 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 ONECUT2O95948 504 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 MPC1LP0DKB6 136 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 RPL21P46778 160 aaKnown RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 PGGT1BP53609 377 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 PMS2P54278 862 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 CDKN2DP55273 166 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 FOXL2P58012 376 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 NCF4Q15080 339 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 ZXDCQ2QGD7 858 aaPredicted RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 BBS9Q3SYG4 887 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 TEDDM1Q5T9Z0 273 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 CPZQ66K79 652 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 FIGLAQ6QHK4 219 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 RNF44Q7L0R7 432 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 PIWIL4Q7Z3Z4 852 aaKnown RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 GALNT7Q86SF2 657 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 ZNF655Q8N720 491 aaPredicted RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 ZNF480Q8WV37 535 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 SKA2Q8WVK7 121 aaPredicted RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 CLIP3Q96DZ5 547 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 RUNDC3BQ96NL0 473 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 MIPEPQ99797 713 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms