RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CRISP3P54108 245 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 CDC42EP1Q00587 391 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 EIF4EBP2Q13542 120 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 LPCAT1Q8NF37 534 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 OR2B2Q9GZK3 357 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 PRM3Q9NNZ6 103 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 SIRT5Q9NXA8 310 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 FBXL12Q9NXK8 326 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 ABI2Q9NYB9 513 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 DICER1Q9UPY3 1922 aaKnown RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 FAM172BPA6NC97 362 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 RGS14O43566 566 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CDKN2CP42773 168 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CXCR4P61073 352 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 VLDLRP98155 873 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 FADDQ13158 208 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 KEAP1Q14145 624 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 KDM4DQ6B0I6 523 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 AFTPHQ6ULP2 937 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 GALNT12Q8IXK2 581 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 MDGA1Q8NFP4 955 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 TP53INP1Q96A56 240 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 ULK4Q96C45 1275 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 SERPINB11Q96P15 392 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 C1QTNF3Q9BXJ4 246 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 BEX2Q9BXY8 128 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 PAQR5Q9NXK6 330 aaPredicted RBP14.32□□□□□ -0.12
COL6A2-202ENST00000310645 BTBD3Q9Y2F9 522 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 F8W810 466 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 KLK8O60259 260 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 ULK1O75385 1050 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 OTCP00480 354 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 IL6P05231 212 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CTSHP09668 335 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 EFNA1P20827 205 aaPredicted RBP14.32□□□□□ -0.12
COL6A2-202ENST00000310645 S100A3P33764 101 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 PBX3P40426 434 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 GNPDA1P46926 289 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CTSL3PQ5NE16 218 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 FAM171A1Q5VUB5 890 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 NRARPQ7Z6K4 114 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 TSPYL5Q86VY4 417 aaPredicted RBP14.32□□□□□ -0.12
COL6A2-202ENST00000310645 SIX5Q8N196 739 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 TRIM62Q9BVG3 475 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 NDRG4Q9ULP0 352 aaKnown RBP14.32□□□□□ -0.12
COL6A2-202ENST00000310645 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 RALGAPA2Q2PPJ7 1873 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 M0R129 80 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CHRNB1P11230 501 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 ODC1P11926 461 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 COL6A1P12109 1028 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 HTR7P34969 479 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF45Q02386 682 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 NPRL3Q12980 569 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 SLC14A1Q13336 389 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL6A2-202ENST00000310645 CCDC58Q4VC31 144 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 SNX20Q7Z614 316 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 ENTHD1Q8IYW4 607 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 RGL4Q8IZJ4 473 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 KIAA1958Q8N8K9 716 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 TTPALQ9BTX7 342 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 TNKS2Q9H2K2 1166 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 MAGIXQ9H6Y5 334 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 LRTM1Q9HBL6 345 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 KCNH4Q9UQ05 1017 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 PCDHGC4Q9Y5F7 938 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
COL6A2-202ENST00000310645 LTBP3Q9NS15 1303 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 RPLP0P05388 317 aaKnown RBP14.31□□□□□ -0.12
COL6A2-202ENST00000310645 STSP08842 583 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 NRIP1P48552 1158 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 GPR15P49685 360 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 DUSP28Q4G0W2 176 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF544Q6NX49 715 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 TUBA3EQ6PEY2 450 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 CDC26Q8NHZ8 85 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 NLE1Q9NVX2 485 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-202ENST00000310645 GPR83Q9NYM4 423 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 TAS2R16Q9NYV7 291 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 C2orf81A6NN90 581 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 AREL1O15033 823 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 AQP1P29972 269 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 DNAJA1P31689 397 aaKnown RBP14.31□□□□□ -0.12
COL6A2-202ENST00000310645 SLC19A1P41440 591 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 SLC15A1P46059 708 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 TAB1Q15750 504 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 FAM209AQ5JX71 171 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 OVOS1Q6IE37 1185 aa14.31□□□□□ -0.12
COL6A2-202ENST00000310645 PDE12Q6L8Q7 609 aaKnown RBP14.31□□□□□ -0.12
COL6A2-202ENST00000310645 RASAL3Q86YV0 1011 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms