RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CD40LGP29965 261 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 GNG2P59768 71 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 RPL26P61254 145 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 STXBP1P61764 594 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 EIF5AP63241 154 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 ADAM8P78325 824 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 GHRHRQ02643 423 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 CBLBQ13191 982 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 IL17AQ16552 155 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 PLCZ1Q86YW0 608 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 GHDCQ8N2G8 530 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 STOML3Q8TAV4 291 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 P2RY11Q96G91 374 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 HNRNPABQ99729 332 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 PHPT1Q9NRX4 125 aaPredicted RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 GKN1Q9NS71 199 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 DNAJB9Q9UBS3 223 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 CFL2Q9Y281 166 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ST14Q9Y5Y6 855 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ZNF780BQ9Y6R6 833 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 UBR3Q6ZT12 1888 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SMCO3A2RU48 225 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 RNASEH2AO75792 299 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 RHOP08100 348 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 HTR7P34969 479 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 DNASE1L1P49184 302 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TSPAN5P62079 268 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SLC10A6Q3KNW5 377 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 GPR153Q6NV75 609 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 FOXR2Q6PJQ5 311 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 FAM124AQ86V42 546 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 PDSS2Q86YH6 399 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SLC39A11Q8N1S5 342 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TMIEQ8NEW7 156 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 IL12RB2Q99665 862 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TRIM2Q9C040 744 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SLC39A8Q9C0K1 460 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 POLR2J2Q9GZM3 115 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 SGK2Q9HBY8 427 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 NEMP2A6NFY4 417 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 BOLA2-SMG1P6H3BVE0 249 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 L7N2F9 121 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 HAS3O00219 553 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 OR7A10O76100 309 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 MC4RP32245 332 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 NOVP48745 357 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 DUSP3P51452 185 aaPredicted RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 DEFB103AP81534 67 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 NOMO1Q15155 1222 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TGFBIQ15582 683 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TMEM164Q5U3C3 297 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ASCC1Q8N9N2 400 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 KCTD13Q8WZ19 329 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 BSNDQ8WZ55 320 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 AGAP2Q99490 1192 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 EBF4Q9BQW3 602 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 AGO3Q9H9G7 860 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 PCDH10Q9P2E7 1040 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 GULP1Q9UBP9 304 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ATPIF1Q9UII2 106 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TBX21Q9UL17 535 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 BAZ2BQ9UIF8 2168 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 RIIAD1A6NNX1 92 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 HCN1O60741 890 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CKMT2P17540 419 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TPSB2P20231 275 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RBM34P42696 430 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 SMAD4Q13485 552 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 RAB33AQ14088 237 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TPSAB1Q15661 275 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 FAM26DQ5JW98 314 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 POTEHQ6S545 545 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TDRPQ86YL5 185 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 HMGB4Q8WW32 186 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 NSMCE3Q96MG7 304 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 NECTIN3Q9NQS3 549 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RABL2AQ9UBK7 228 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 C12orf71A8MTZ7 269 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 QSOX1O00391 747 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SCN2BO60939 215 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RLN2P04090 185 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 MTHFD1P11586 935 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 OGNP20774 298 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 LPOP22079 712 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 ENTPD1P49961 510 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SEC13P55735 322 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RPL19P84098 196 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 MC1RQ01726 317 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SRSF11Q05519 484 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 UAP1L1Q3KQV9 507 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RTL4Q6ZR62 310 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TOMM5Q8N4H5 51 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 BANPQ8N9N5 519 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 STON2Q8WXE9 905 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 NKD1Q969G9 470 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 DNAJC19Q96DA6 116 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 C8orf48Q96LL4 319 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms