RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PACRGLQ8N7B6 248 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CYB5D2Q8WUJ1 264 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 MTERF1Q99551 399 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM181Q9P2C4 612 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 URODP06132 367 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TYMPP19971 482 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SLC26A3P40879 764 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 FAM217AQ8IXS0 508 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SPARTQ8N0X7 666 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 DTWD1Q8N5C7 304 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 OR4F6Q8NGB9 312 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TRIM54Q9BYV2 358 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ZFYVE1Q9HBF4 777 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 NEK6Q9HC98 313 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ERVK13-1Q9NX77 482 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 FFAR2O15552 330 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 STC2O76061 302 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 MLYCDO95822 493 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CRATP43155 626 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 RPL34P49207 117 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 OR2B6P58173 313 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CHRNA6Q15825 494 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 PHKG1Q16816 387 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SLC36A3Q495N2 470 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 PDE12Q6L8Q7 609 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CADM3Q8N126 398 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM132CQ8N3T6 1108 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 AGPAT4Q9NRZ5 378 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ADPRHL2Q9NX46 363 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF490Q9ULM2 529 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 TMED5Q9Y3A6 229 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 PCDHGA3Q9Y5H0 932 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 AQP9O43315 295 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF24P17028 368 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ARPC4P59998 168 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 GSTM4Q03013 218 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 STARD3Q14849 445 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 RFX4Q33E94 735 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 CYBRD1Q53TN4 286 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ATAD3BQ5T9A4 648 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 LETMD1Q6P1Q0 360 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TP63Q9H3D4 680 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 RMND5AQ9H871 391 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TIGARQ9NQ88 270 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 DNAJB9Q9UBS3 223 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 M0R129 80 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 RGS14O43566 566 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ITGALP20701 1170 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 HTR1BP28222 390 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TMBIM6P55061 237 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TLE2Q04725 743 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TOP3AQ13472 1001 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 RAPSNQ13702 412 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ANKRD13BQ86YJ7 626 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 SYT12Q8IV01 421 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 ATL1Q8WXF7 558 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 STARD8Q92502 1023 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 UROC1Q96N76 676 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 FAM118AQ9NWS6 357 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 SATB2Q9UPW6 733 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
RETREG3-201ENST00000309428 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 VPS4BO75351 444 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 PSIP1O75475 530 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 VIPP01282 170 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 GSTM1P09488 218 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 SRP54P61011 504 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 GPR17Q13304 367 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 RFTN2Q52LD8 501 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 Q6ZVU0 165 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 PDPRQ8NCN5 879 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 SNTG1Q9NSN8 517 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms