RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ADRB1P08588 477 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 HOXB3P14651 431 aaPredicted RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CDH3P22223 829 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 HRH2P25021 359 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 IMPA1P29218 277 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 RPA3P35244 121 aaPredicted RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CCT5P48643 541 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 TAP2Q03519 686 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CCSMST1Q4G0I0 132 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CACHD1Q5VU97 1274 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CAPN13Q6MZZ7 669 aaPredicted RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 METTL2BQ6P1Q9 378 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 AGTRAPQ6RW13 159 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 ZNF574Q6ZN55 896 aaPredicted RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CHCHD4Q8N4Q1 142 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 LMNTD1Q8N9Z9 388 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 PDPRQ8NCN5 879 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 OR2W6PQ8NHA6 318 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 KCTD4Q8WVF5 259 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 JPH3Q8WXH2 748 aaPredicted RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 ALKBH8Q96BT7 664 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 NXNL1Q96CM4 212 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 CCDC74BQ96LY2 380 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 MIPEPQ99797 713 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 MRPL57Q9BQC6 102 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 HAUS8Q9BT25 410 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 SEMA6CQ9H3T2 930 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 ALG9Q9H6U8 611 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 NEUROG3Q9Y4Z2 214 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 RP1P56715 2156 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 A0A0J9YY10 115 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 GLRA3O75311 464 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 MYZAPP0CAP1 466 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 H2AFXP16104 143 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 UGT2B7P16662 529 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 ARL4DP49703 201 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 PDX1P52945 283 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 GFERP55789 205 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 HSD11B2P80365 405 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 ZNF844Q08AG5 666 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 TARDBPQ13148 414 aaKnown RBP eCLIP17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 SF1Q15637 639 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 TMTC4Q5T4D3 741 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 SPATA6LQ8N4H0 392 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 WDR36Q8NI36 951 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 ZUFSPQ96AP4 578 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 PTERQ96BW5 349 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 IL17FQ96PD4 163 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 MRPL46Q9H2W6 279 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 ANKMY1Q9P2S6 941 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 KLK4Q9Y5K2 254 aa17.29■□□□□ 0.36
SSSCA1-201ENST00000309328 TARM1B6A8C7 271 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 RGS16O15492 202 aaPredicted RBP17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 MSL3P1P0C860 447 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 PYGBP11216 843 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 CMPK1P30085 196 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 GGT5P36269 586 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 SHC2P98077 582 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 IRF9Q00978 393 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 FOXC1Q12948 553 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 DLG1Q12959 904 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 OR4D1Q15615 310 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 FAM92BQ6ZTR7 304 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 TMPRSS9Q7Z410 1059 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 BPHLQ86WA6 291 aaPredicted RBP17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 KLHDC8AQ8IYD2 350 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 LSMEM2Q8N112 164 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 OR56A3Q8NH54 315 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 RHBDF1Q96CC6 855 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 SLC41A2Q96JW4 573 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 GPR78Q96P69 363 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 ZIM3Q96PE6 472 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 ATOH8Q96SQ7 321 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 SGPP1Q9BX95 441 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 CAPS2Q9BXY5 557 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 B3GNT4Q9C0J1 378 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 NRSN2Q9GZP1 204 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 MKS1Q9NXB0 559 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 CD274Q9NZQ7 290 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 BTRCQ9Y297 605 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 PCDHGA8Q9Y5G5 932 aa17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 TNPO3Q9Y5L0 923 aaKnown RBP17.28■□□□□ 0.36
SSSCA1-201ENST00000309328 B4E171 279 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 PRICKLE3O43900 615 aaPredicted RBP17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 GUCA1CO95843 209 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 NELFEP18615 380 aaKnown RBP17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 KRT4P19013 534 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 CRHR1P34998 444 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 TSPAN7P41732 249 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 RAB15P59190 212 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 TBPL1P62380 186 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 PRDX1Q06830 199 aaKnown RBP17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 CASP8Q14790 479 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 TECRLQ5HYJ1 363 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 CEP85LQ5SZL2 805 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms