RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CPZQ66K79 652 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 CNSTQ6PJW8 725 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 PTRH1Q86Y79 214 aaKnown RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 ZBTB2Q8N680 514 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 OR2A1Q8NGT9 310 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 C9orf43Q8TAL5 461 aaPredicted RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 GRK7Q8WTQ7 553 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 WDR83Q9BRX9 315 aaKnown RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 FBXO6Q9NRD1 293 aaPredicted RBP19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 SLC22A11Q9NSA0 550 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 EURLQ9NYK6 297 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 FAM169AQ9Y6X4 670 aa19.06■□□□□ 0.64
PDZRN3-202ENST00000308537 ZSCAN9O15535 394 aaPredicted RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 PSIP1O75475 530 aaKnown RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 ZIC2O95409 532 aaPredicted RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 TCP1P17987 556 aaKnown RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 FASTKQ14296 549 aaKnown RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 CYP2A13Q16696 494 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 PRICKLE2Q7Z3G6 844 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 IGDCC3Q8IVU1 814 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 SEC14L1Q92503 715 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 DPH2Q9BQC3 489 aaPredicted RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 SAMD15Q9P1V8 674 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 DHCR7Q9UBM7 475 aaKnown RBP19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 TLK1Q9UKI8 766 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 PLCL2Q9UPR0 1127 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 TP53TG5Q9Y2B4 290 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 MAN2B2Q9Y2E5 1009 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 AP1M2Q9Y6Q5 423 aa19.05■□□□□ 0.64
PDZRN3-202ENST00000308537 GOLGA6L10A0A0M3HER8 536 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 CTSVO60911 334 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 GABRB3P28472 473 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 CCNFP41002 786 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 GRIA3P42263 894 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 MPP1Q00013 466 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 KLHL38Q2WGJ6 581 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 TCTN3Q6NUS6 607 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 FIGLAQ6QHK4 219 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 CYHR1Q6ZMK1 362 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 HOOK3Q86VS8 718 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 GPR135Q8IZ08 494 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 ZNF655Q8N720 491 aaPredicted RBP19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 THAP4Q8WY91 577 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 SLC22A18Q96BI1 424 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 RAB11FIP5Q9BXF6 653 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 TRIM4Q9C037 500 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 SYNPO2LQ9H987 977 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 MLXIPLQ9NP71 852 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 KLHL42Q9P2K6 505 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 TSR3Q9UJK0 312 aaKnown RBP19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 SLC39A10Q9ULF5 831 aa19.04■□□□□ 0.64
PDZRN3-202ENST00000308537 MYO1CO00159 1063 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 MAP3K7O43318 606 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 RFPL1O75677 317 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 HAUS5O94927 633 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 FKBP9O95302 570 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 ONECUT2O95948 504 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 HBQ1P09105 142 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 CHRM3P20309 590 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 FOXL2P58012 376 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 DHX9Q08211 1270 aaKnown RBP19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 CRYMQ14894 314 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 LONRF1Q17RB8 773 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 HSP90AA5PQ58FG0 334 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 MRPL14Q6P1L8 145 aaKnown RBP19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 ATG14Q6ZNE5 492 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 MCATQ8IVS2 390 aaKnown RBP19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 LMNTD2Q8IXW0 634 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 OR2L3Q8NG85 312 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 PROKR1Q8TCW9 393 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 CD200R1Q8TD46 325 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 KCNJ9Q92806 393 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 EPN3Q9H201 632 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 C20orf96Q9NUD7 363 aaPredicted RBP19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 SPATA7Q9P0W8 599 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 FBXO5Q9UKT4 447 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 SNX7Q9UNH6 387 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 VPS9D1Q9Y2B5 631 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 MAD1L1Q9Y6D9 718 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 PTPN13Q12923 2485 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 NUP210LQ5VU65 1888 aa19.03■□□□□ 0.64
PDZRN3-202ENST00000308537 CEACAM4O75871 244 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 MED26O95402 600 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 MCM3P25205 808 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 CHAF1BQ13112 559 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 THOC5Q13769 683 aaKnown RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 PPP1R7Q15435 360 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 SF1Q15637 639 aaKnown RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 LACTB2Q53H82 288 aaPredicted RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 C1orf189Q5VU69 101 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 TLDC1Q6P9B6 456 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 NEK10Q6ZWH5 1172 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 LRRC56Q8IYG6 542 aaPredicted RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 FBXO15Q8NCQ5 510 aaPredicted RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 OR9A1PQ8NGU1 263 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 PWWP2AQ96N64 755 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 DHRS7Q9Y394 339 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 HEMK1Q9Y5R4 338 aaPredicted RBP19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 MRFAP1Q9Y605 127 aa19.02■□□□□ 0.64
PDZRN3-202ENST00000308537 DOCK10Q96BY6 2186 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms