RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TSPAN5P62079 268 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 EVX2Q03828 476 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SP140Q13342 867 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC41A1Q8IVJ1 513 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ART4Q93070 314 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 MGME1Q9BQP7 344 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PELOQ9BRX2 385 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PLK2Q9NYY3 685 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHGB2Q9Y5G2 931 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 HAS3O00219 553 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 EIF3FO00303 357 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 DCXO43602 365 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 LYPLA1O75608 230 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ALG1LQ6GMV1 187 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SETD7Q8WTS6 366 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SMPDL3BQ92485 455 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 NMD3Q96D46 503 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 MS4A12Q9NXJ0 267 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ANKRD66B4E2M5 251 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 E2F3O00716 465 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CASKO14936 926 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 UGT2B11O75310 529 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 OR4Q2P0C623 313 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CTPS1P17812 591 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 IRAK1P51617 712 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 WDR5P61964 334 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 RHBDF2Q6PJF5 856 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ZC3H3Q8IXZ2 948 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 BPIFB6Q8NFQ5 453 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TCP10LQ8TDR4 215 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ADAMTS18Q8TE60 1221 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 FCRL4Q96PJ5 515 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 DPYSL5Q9BPU6 564 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 EVLQ9UI08 416 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ITGB1BP2Q9UKP3 347 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CALCAP01258 141 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PIK3CBP42338 1070 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ADAM8P78325 824 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 BHLHE22Q8NFJ8 381 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ZBED6CLQ96FA7 236 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 EXOC2Q96KP1 924 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TSGA13Q96PP4 275 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ACAT2Q9BWD1 397 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHB16Q9NRJ7 776 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 OBP2AQ9NY56 170 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 M0R129 80 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PGLSO95336 258 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CST1P01037 141 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 IGHEP01854 428 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ALDH4A1P30038 563 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 MRPL49Q13405 166 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PAFAH1B3Q15102 231 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PHF19Q5T6S3 580 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 C22orf39Q6P5X5 142 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 UNQ6126/PRO20091Q6UXV3 157 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 OR4C6Q8NH72 309 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ISG20Q96AZ6 181 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PSKH2Q96QS6 385 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TRIB3Q96RU7 358 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SMURF1Q9HCE7 757 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SPTBP11277 2137 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PLK4O00444 970 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 SEC24AO95486 1093 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PRPS2P11908 318 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 HNF1BP35680 557 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 OLFML1Q6UWY5 402 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC29A4Q7RTT9 530 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PLCZ1Q86YW0 608 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 TDHQ8IZJ6 230 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PIGXQ8TBF5 258 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 SLCO2A1Q92959 643 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 TBATAQ96M53 351 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 SCGB3A2Q96PL1 93 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 DBTP11182 482 aaKnown RBP8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 TCEAL1Q15170 157 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 ANO7Q6IWH7 933 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 RFWD3Q6PCD5 774 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 DGLUCYQ7Z3D6 616 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PRELID2Q8N945 189 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 MRPL43Q8N983 215 aaKnown RBP8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 IER2Q9BTL4 223 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 FUT8Q9BYC5 575 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 MRPS30Q9NP92 439 aaKnown RBP8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PFDN2Q9UHV9 154 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 GJD2Q9UKL4 321 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 DUXAA6NLW8 204 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 HDAC3O15379 428 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF20P17024 532 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 CD247P20963 164 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 PROZP22891 400 aa8.15□□□□□ -1.1
PCDHB1-201ENST00000306549 TNFRSF4P43489 277 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms