RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SZRD1Q7Z422 152 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 PEX5LQ8IYB4 626 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 CADM2Q8N3J6 435 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF382Q96SR6 550 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 SMOC2Q9H3U7 446 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 I6L893 689 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 HTR2BP41595 481 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 BNC1Q01954 994 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 NPRL3Q12980 569 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 PAQR9Q6ZVX9 377 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 VTCN1Q7Z7D3 282 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 RIMKLAQ8IXN7 391 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 FKBP10Q96AY3 582 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 GORASP2Q9H8Y8 452 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TM9SF3Q9HD45 589 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 PCDHGC4Q9Y5F7 938 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 GOLGA4Q13439 2230 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 FPGTO14772 594 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 MYL12BO14950 172 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 KIAA0513O60268 411 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 OR1I1O60431 355 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SLITRK5O94991 958 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CRYZL1O95825 349 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 MTHFD2P13995 350 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 PSMA1P25786 263 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CRATP43155 626 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CPT1AP50416 773 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 DGKEP52429 567 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TTLL9Q3SXZ7 439 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TTC23LQ6PF05 361 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 LINC00299Q6ZSB3 139 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TRIM45Q9H8W5 580 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 UBA2Q9UBT2 640 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 A8MX80 341 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 FFAR2O15552 330 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 AP2A2O94973 939 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SMIM10L2AP0DMW4 78 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SMIM10L2BP0DMW5 78 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 XPAP23025 273 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SOAT1P35610 550 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 PBX3P40426 434 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 ST3GAL4Q11206 333 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 MAD2L1BPQ15013 274 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 AAK1Q2M2I8 961 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 DPY19L1Q2PZI1 675 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SYT6Q5T7P8 510 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 BHMTQ93088 406 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 ING3Q9NXR8 418 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 COL1A2P08123 1366 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 FAM240BA0A1B0GVZ2 78 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 MLLT6P55198 1093 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CDH12P55289 794 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CREMQ03060 361 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 WDR45BQ5MNZ6 344 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 NRARPQ7Z6K4 114 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 HOMEZQ8IX15 550 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 DCAF13Q9NV06 445 aaKnown RBP12.73□□□□□ -0.37
TRIM35-201ENST00000305364 MARCH2Q9P0N8 246 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 SSR3Q9UNL2 185 aa12.73□□□□□ -0.37
TRIM35-201ENST00000305364 GNG14A0A1W2PPG7 69 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 CTDSP2O14595 271 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 SCAMP3O14828 347 aaKnown RBP12.72□□□□□ -0.37
TRIM35-201ENST00000305364 RPS17P08708 135 aaKnown RBP12.72□□□□□ -0.37
TRIM35-201ENST00000305364 HTR1AP08908 422 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 SPNP16150 400 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 ATP6V1E1P36543 226 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 ABHD18Q0P651 414 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 OR4F3Q6IEY1 312 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
TRIM35-201ENST00000305364 DPP10Q8N608 796 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 HSH2DQ96JZ2 352 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 COL21A1Q96P44 957 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 SEPT5Q99719 369 aaPredicted RBP12.72□□□□□ -0.37
TRIM35-201ENST00000305364 ATP13A1Q9HD20 1204 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 GPR83Q9NYM4 423 aa12.72□□□□□ -0.37
TRIM35-201ENST00000305364 NUFIP1Q9UHK0 495 aaKnown RBP12.72□□□□□ -0.37
TRIM35-201ENST00000305364 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms