RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 IMPDH1P20839 514 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ACP1P24666 158 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 MAP4P27816 1152 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 PSMB5P28074 263 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 CSF2RBP32927 897 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 GPR3P46089 330 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 CCR10P46092 362 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 HSPA7P48741 367 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 HNMTP50135 292 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 DNAJB13P59910 316 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 NAE1Q13564 534 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ZNF678Q5SXM1 525 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 NKAIN2Q5VXU1 208 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ANKS6Q68DC2 871 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ZNF574Q6ZN55 896 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 SPRED1Q7Z699 444 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 TRIM48Q8IWZ4 208 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 FAM20CQ8IXL6 584 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 LSMEM2Q8N112 164 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 FBXO39Q8N4B4 442 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ANKRD42Q8N9B4 389 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 LCN9Q8WX39 176 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 L3HYPDHQ96EM0 354 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 CNDP2Q96KP4 475 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 OR2A14Q96R47 310 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 GATA5Q9BWX5 397 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 C20orf27Q9GZN8 174 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 GSTO2Q9H4Y5 243 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ZNF395Q9H8N7 513 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 CNOT10Q9H9A5 744 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 EVA1BQ9NVM1 165 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 OR6C2Q9NZP2 312 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 NCKIPSDQ9NZQ3 722 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 ZNF225Q9UK10 706 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 SLC22A14Q9Y267 594 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 RP1P56715 2156 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 GOLGA4Q13439 2230 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 CPED1A4D0V7 1026 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 OR5K3A6NET4 321 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 NTN3O00634 580 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 UBFD1O14562 309 aaKnown RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 UBXN7O94888 489 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 DKK1O94907 266 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 HIST1H2AGP0C0S8 130 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 HOXB3P14651 431 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 TYRP1P17643 537 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 POLR2CP19387 275 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 HIST1H2ADP20671 130 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 EEF1DP29692 281 aaKnown RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 SHMT2P34897 504 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 ACADVLP49748 655 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 EPHA4P54764 986 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 NAGLUP54802 743 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 TBPL1P62380 186 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 HERVK_113P63132 956 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 CCL7P80098 99 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 PCDH1Q08174 1060 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 E2F2Q14209 437 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 KRT33BQ14525 404 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 TTC23LQ6PF05 361 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 FRA10AC1Q70Z53 315 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 EFL1Q7Z2Z2 1120 aaKnown RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 AVL9Q8NBF6 648 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 ZNF483Q8TF39 744 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 SETD7Q8WTS6 366 aaKnown RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 SH3KBP1Q96B97 665 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 HIST1H2AHQ96KK5 128 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 TSNARE1Q96NA8 513 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 HIST1H2AJQ99878 128 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 EGFL8Q99944 293 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 SELENOSQ9BQE4 189 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 CCDC3Q9BQI4 270 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 H2AFJQ9BTM1 129 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 ERVK-6Q9BXR3 956 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.16□□□□□ -0.94
RFX3-201ENST00000302303 RAB33BQ9H082 229 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 ABCG4Q9H172 646 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 SRMSQ9H3Y6 488 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 SYNPO2LQ9H987 977 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 TNFRSF12AQ9NP84 129 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 TMEM9Q9P0T7 183 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 EPHA6Q9UF33 1036 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 PCTPQ9UKL6 214 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 FAM186AA6NE01 2351 aa9.16□□□□□ -0.94
RFX3-201ENST00000302303 WDR91A4D1P6 747 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 RHPN2P1A8MT19 583 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 OR7A17O14581 309 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 BIRC5O15392 142 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 ITM2AO43736 263 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 NRP2O60462 931 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 GFRA3O60609 400 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 TRIM13O60858 407 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 STK16O75716 305 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 C9P02748 559 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms