RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SREK1Q8WXA9 508 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 UBXN10Q96LJ8 280 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 FAM111AQ96PZ2 611 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 TEFMQ96QE5 360 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 OLFM1Q99784 485 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 RIOK2Q9BVS4 552 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 ZMYND15Q9H091 742 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 OCIAD1Q9NX40 245 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 TRMT6Q9UJA5 497 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PILRAQ9UKJ1 303 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PRR19A6NJB7 356 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 EIF3FO00303 357 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 KPNA5O15131 536 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 PLIN3O60664 434 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 F7P08709 466 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 RBP1P09455 135 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 OR56A5P0C7T3 313 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 MYCLP1P12525 358 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 GM2AP17900 193 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 UGT1A6P19224 532 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 UGT1A1P22309 533 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 UGT1A4P22310 534 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 MPSTP25325 297 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 MAP4P27816 1152 aaKnown RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 CD97P48960 835 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 PRKAA2P54646 552 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 MC1RQ01726 317 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 SQSTM1Q13501 440 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 CTSL3PQ5NE16 218 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 GPRC6AQ5T6X5 926 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 LRRC8EQ6NSJ5 796 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 PHYKPLQ8IUZ5 450 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 ACVR1CQ8NER5 493 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 GLYATL1Q969I3 302 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 PAIP2Q9BPZ3 127 aaKnown RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 NMRAL1Q9HBL8 299 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 LATS2Q9NRM7 1088 aa20.47■□□□□ 0.87
SMCO4-201ENST00000298966 PHPT1Q9NRX4 125 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 TRNAU1APQ9NX07 287 aaKnown RBP20.47■□□□□ 0.87
SMCO4-201ENST00000298966 IGHV1OR21-1A0A087WYE8 117 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 FAM107AO95990 144 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 GSTM1P09488 218 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 ZNF37AP17032 561 aaPredicted RBP20.46■□□□□ 0.87
SMCO4-201ENST00000298966 SERPINB4P48594 390 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 SEC24CP53992 1094 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 CDKN2DP55273 166 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 ATP6V0D1P61421 351 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 GSTM4Q03013 218 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 ACAP2Q15057 778 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 TTLL9Q3SXZ7 439 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 SLC30A9Q6PML9 568 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 PATE1Q8WXA2 126 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 SCAMP4Q969E2 229 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 NSRP1Q9H0G5 558 aaKnown RBP20.46■□□□□ 0.87
SMCO4-201ENST00000298966 KCNK4Q9NYG8 393 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 CD84Q9UIB8 345 aa20.46■□□□□ 0.87
SMCO4-201ENST00000298966 LOC101059948A0A1B0GTJ6 334 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 OR1I1O60431 355 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 PROCP04070 461 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 TAC1P20366 129 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 MSH3P20585 1137 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 DRD4P21917 467 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 AK4P27144 223 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 CSF2RBP32927 897 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 GPR1P46091 355 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 GNPDA1P46926 289 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 PPM1FP49593 454 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 ASPHQ12797 758 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 HIST2H2BCQ6DN03 193 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 TMEM71Q6P5X7 295 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 RFLNAQ6ZTI6 216 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 CENPLQ8N0S6 344 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 NAGSQ8N159 534 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 TEX19Q8NA77 164 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 BCAS4Q8TDM0 211 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 INPP5DQ92835 1189 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 PDLIM5Q96HC4 596 aaKnown RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 CCT8L2Q96SF2 557 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 MRPL57Q9BQC6 102 aaKnown RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 TMEM216Q9P0N5 145 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 TMEM9Q9P0T7 183 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 PLEKHB1Q9UF11 243 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 RUVBL2Q9Y230 463 aaKnown RBP20.45■□□□□ 0.86
SMCO4-201ENST00000298966 DHRS7Q9Y394 339 aa20.45■□□□□ 0.86
SMCO4-201ENST00000298966 KLF11O14901 512 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 PPM1DO15297 605 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 H2AFYO75367 372 aaKnown RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 ATP1B2P14415 290 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 TCN2P20062 427 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 CHRM3P20309 590 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 AKT1P31749 480 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 RGS4P49798 205 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 GPLD1P80108 840 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 ABHD18Q0P651 414 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 CEACAM20Q6UY09 585 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 ADAMTSL4Q6UY14 1074 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 PELI3Q8N2H9 469 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 CCDC63Q8NA47 563 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 ARMC2Q8NEN0 867 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms