RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 AARSD1Q9BTE6 412 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HACL1Q9UJ83 578 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TRPM7Q96QT4 1865 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GPR89AB7ZAQ6 455 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RBAK-RBAKDNI3L0D1 243 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ADGRB1O14514 1584 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GPR89BP0CG08 455 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 COX7A2P14406 83 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PTPN2P17706 415 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SULT1E1P49888 294 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NR0B1P51843 470 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DLX5P56178 289 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MC2RQ01718 297 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NME3Q13232 169 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC9A9Q8IVB4 645 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR10T2Q8NGX3 314 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC44A1Q8WWI5 657 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TM9SF4Q92544 642 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR2M4Q96R27 311 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PAQR5Q9NXK6 330 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FOCADQ5VW36 1801 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 VWA8A3KMH1 1905 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GLYATL1P3A0A0U1RQE8 302 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 A0A1W2PRQ8 180 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GRXCR2A6NFK2 248 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TLX3O43711 291 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 IL6STP40189 918 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MAGEA11P43364 429 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 POLR2JP52435 117 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FAM69CQ0P6D2 419 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DYRK1AQ13627 763 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TIGD3Q6B0B8 471 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TRMT10BQ6PF06 316 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 USP45Q70EL2 814 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 KLHDC8BQ8IXV7 354 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RNF31Q96EP0 1072 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ACBD6Q9BR61 282 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MAGIXQ9H6Y5 334 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NDUFB5O43674 189 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TDP2O95551 362 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ACVR2AP27037 513 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SNCAP37840 140 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LHX1P48742 406 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PFKPQ01813 784 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HEPACAMQ14CZ8 416 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 UQCC3Q6UW78 93 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF852Q6ZMS4 543 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM200AQ86VY9 491 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 BEST3Q8N1M1 668 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GMCL1P1Q8NEA9 526 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR4C15Q8NGM1 316 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FEM1CQ96JP0 617 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DNAJC1Q96KC8 554 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CDK15Q96Q40 435 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MBD5Q9P267 1494 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 A0A0G2JN53 185 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR6C6A6NF89 314 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 WASH4PA8MWX3 477 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 AZIN1O14977 448 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 UPK1BO75841 260 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 IFNA5P01569 189 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 BAG6P46379 1132 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 AVPI1Q5T686 147 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ADGRD1Q6QNK2 874 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CCBE1Q6UXH8 406 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HSDL2Q6YN16 418 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SH3RF1Q7Z6J0 888 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FBXO33Q7Z6M2 555 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GSTCDQ8NEC7 633 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC22A17Q8WUG5 538 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GLT1D1Q96MS3 346 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF700Q9H0M5 742 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PCIF1Q9H4Z3 704 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FBXL4Q9UKA2 621 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LRFN2Q9ULH4 789 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF462Q96JM2 2506 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 INMT-MINDY4F8WBC2 141 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CCNB2O95067 398 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 KCNK2O95069 426 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HLA-HP01893 362 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GNPDA1P46926 289 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GAD2Q05329 585 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC1A5Q15758 541 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DCST2Q5T1A1 773 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 AGAP6Q5VW22 663 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TAPT1Q6NXT6 567 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SEPT12Q8IYM1 358 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 C3orf58Q8NDZ4 430 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HPSE2Q8WWQ2 592 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PIGBQ92521 554 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC25A36Q96CQ1 311 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LRRC58Q96CX6 371 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 AGAP4Q96P64 663 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CBWD1Q9BRT8 395 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SCUBE2Q9NQ36 999 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TBX20Q9UMR3 447 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 COG5Q9UP83 839 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RBM7Q9Y580 266 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms