RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 C8AP07357 584 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 CCNOP22674 350 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 CMPK1P30085 196 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 SDC2P34741 201 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 STAT5AP42229 794 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 RPS14P62263 151 aaKnown RBP15.12■□□□□ 0.01
FNDC1-201ENST00000297267 SMU1Q2TAY7 513 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 LRRC58Q96CX6 371 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 TEFMQ96QE5 360 aaKnown RBP15.12■□□□□ 0.01
FNDC1-201ENST00000297267 PCDHA2Q9Y5H9 948 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 RIIAD1A6NNX1 92 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 MFSD5Q6N075 450 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 GALNT11Q8NCW6 608 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 OR4E2Q8NGC2 313 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 NUS1Q96E22 293 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 FBXL18Q96ME1 805 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
FNDC1-201ENST00000297267 RSL1D1O76021 490 aaKnown RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 BEST1O76090 585 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 RHPN2P1A8MT19 583 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 TYRP1P17643 537 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 NPTX1Q15818 432 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 TMPRSS11AQ6ZMR5 421 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 THAP3Q8WTV1 239 aaPredicted RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 C8orf48Q96LL4 319 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 MYH15Q9Y2K3 1946 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 ZNF99A8MXY4 864 aaPredicted RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 BCAP31P51572 246 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 C14orf80Q86SX3 495 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 MSLNLQ96KJ4 702 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 SLC38A3Q99624 504 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 MIPEPQ99797 713 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 RNF121Q9H920 327 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 VNN3Q9NY84 501 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 TULP3O75386 442 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 CKMT1AP12532 417 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 DGKGP49619 791 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 SYNPOQ8N3V7 929 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 PPP1R14BQ96C90 147 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 CENPNQ96H22 339 aaPredicted RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 FCRL3Q96P31 734 aaPredicted RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 SLC7A8Q9UHI5 535 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 PCDHB1Q9Y5F3 818 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 FEZF1A0PJY2 475 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 A8MT66 165 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 OAZ2O95190 189 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 ECDO95905 644 aaPredicted RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 HOXD13P35453 343 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 LRRC32Q14392 662 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 OR4F6Q8NGB9 312 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 DUSP26Q9BV47 211 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 MYEF2Q9P2K5 600 aaKnown RBP15.11■□□□□ 0.01
FNDC1-201ENST00000297267 KCNK6Q9Y257 313 aa15.11■□□□□ 0.01
FNDC1-201ENST00000297267 CPED1A4D0V7 1026 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 TSPAN9O75954 239 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 TSHRP16473 764 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 MYBPC3Q14896 1274 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SLC35G1Q2M3R5 365 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SLC22A16Q86VW1 577 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 TP53INP2Q8IXH6 220 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SLC13A3Q8WWT9 602 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 OR51B5Q9H339 312 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 ZNF860A6NHJ4 632 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 OR6C75A6NL08 312 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 G6PDP11413 515 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 EDNRAP25101 427 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 XKP51811 444 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 RPS13P62277 151 aaKnown RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CDKL1Q00532 357 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CRHR2Q13324 411 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 NNATQ16517 81 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SNX20Q7Z614 316 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 MEX3DQ86XN8 651 aaKnown RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 PIGXQ8TBF5 258 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 TRIM43Q96BQ3 446 aaPredicted RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 DNAJC27Q9NZQ0 273 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 ZNF451Q9Y4E5 1061 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 B4GALT2O60909 372 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 PGAM2P15259 253 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SMIM11AP58511 58 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 C1orf52Q8N6N3 182 aaKnown RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 OR4C6Q8NH72 309 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 TNFAIP8L1Q8WVP5 186 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 SKA1Q96BD8 255 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 AURKBQ96GD4 344 aaPredicted RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CENPMQ9NSP4 180 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CNTN6Q9UQ52 1028 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 HERVK_113P63132 956 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 ALG1LQ6GMV1 187 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CNIH3Q8TBE1 160 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 GPATCH1Q9BRR8 931 aaKnown RBP15.1■□□□□ 0.01
FNDC1-201ENST00000297267 ERVK-6Q9BXR3 956 aa15.1■□□□□ 0.01
FNDC1-201ENST00000297267 CARS2Q9HA77 564 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms