RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 ARNT2Q9HBZ2 717 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 SLC6A20Q9NP91 592 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 TXLNGQ9NUQ3 528 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 NLE1Q9NVX2 485 aaPredicted RBP8.93□□□□□ -0.98
CNOT9-202ENST00000295701 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 NDOR1Q9UHB4 597 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 ZNF232Q9UNY5 417 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 ASF1AQ9Y294 204 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 AAR2Q9Y312 384 aaKnown RBP8.93□□□□□ -0.98
CNOT9-202ENST00000295701 AP1M2Q9Y6Q5 423 aa8.93□□□□□ -0.98
CNOT9-202ENST00000295701 HEATR5BQ9P2D3 2071 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 A0A0J9YY10 115 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 SLC5A10A0PJK1 596 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 ISM1B1AKI9 464 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 SOCS6O14544 535 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 ZSCAN9O15535 394 aaPredicted RBP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 PJA2O43164 708 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 CBFA2T2O43439 604 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 OR1I1O60431 355 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 METTL18O95568 372 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 TPM3P06753 285 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 PRF1P14222 555 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 MCM3P25205 808 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 ITGA3P26006 1051 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 GRIA3P42263 894 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 RPA4Q13156 261 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 TBX2Q13207 712 aaPredicted RBP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 ELOAQ14241 798 aaKnown RBP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 GPR33Q49SQ1 333 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 CCDC38Q502W7 563 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 KCTD11Q693B1 232 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 LINC00114Q6XXX2 140 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 TAX1BP1Q86VP1 789 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 KCNMB4Q86W47 210 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 VRK3Q8IV63 474 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 CDKL3Q8IVW4 592 aaPredicted RBP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 KLHDC8BQ8IXV7 354 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 AMER2Q8N7J2 671 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 HEXDCQ8WVB3 486 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 UBE2Q2Q8WVN8 375 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 PTERQ96BW5 349 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 SPATA13Q96N96 652 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 IP6K3Q96PC2 410 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 IL17FQ96PD4 163 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 AP1M1Q9BXS5 423 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 OSBPL8Q9BZF1 889 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 IRAK4Q9NWZ3 460 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 FBXL4Q9UKA2 621 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 NOVA2Q9UNW9 492 aaKnown RBP8.92□□□□□ -0.98
CNOT9-202ENST00000295701 OSGIN2Q9Y236 505 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 PCDHA13Q9Y5I0 950 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 DUSP10Q9Y6W6 482 aa8.92□□□□□ -0.98
CNOT9-202ENST00000295701 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 CCDC162PA2VCL2 907 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 ENO4A6NNW6 628 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 AKR1B15C9JRZ8 316 aaPredicted RBP8.91□□□□□ -0.98
CNOT9-202ENST00000295701 H7C0S8 307 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 AGPSO00116 658 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 E2F3O00716 465 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 LRRTM2O43300 516 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 ALPPP05187 535 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 TPM1P09493 284 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 MAGP20916 626 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 SHMT2P34897 504 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 SOX8P57073 446 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 CACNG1Q06432 222 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 Q0VFX4 171 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 CYP2A13Q16696 494 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 FCRL6Q6DN72 434 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 ZNF449Q6P9G9 518 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 TTLL10Q6ZVT0 673 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 COX15Q7KZN9 410 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 MCATQ8IVS2 390 aaKnown RBP8.91□□□□□ -0.98
CNOT9-202ENST00000295701 TBC1D21Q8IYX1 336 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
CNOT9-202ENST00000295701 LINC01555Q8NAE3 123 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 CATSPER1Q8NEC5 780 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 OR5K2Q8NHB8 316 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 DNAJB14Q8TBM8 379 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 PROKR1Q8TCW9 393 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 LKAAEAR1Q8TD35 194 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 GRHL3Q8TE85 626 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 STYXQ8WUJ0 223 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 ALG3Q92685 438 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 NDC1Q9BTX1 674 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
CNOT9-202ENST00000295701 VPS37BQ9H9H4 285 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 EURLQ9NYK6 297 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 STOX2Q9P2F5 926 aaPredicted RBP8.91□□□□□ -0.98
CNOT9-202ENST00000295701 PLCL2Q9UPR0 1127 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 PCDHA3Q9Y5H8 950 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
CNOT9-202ENST00000295701 SCN2AQ99250 2005 aa8.9□□□□□ -0.98
CNOT9-202ENST00000295701 ARHGAP10A1A4S6 786 aa8.9□□□□□ -0.98
CNOT9-202ENST00000295701 KRT87PA6NCN2 255 aa8.9□□□□□ -0.98
CNOT9-202ENST00000295701 IQCF5A8MTL0 148 aa8.9□□□□□ -0.98
CNOT9-202ENST00000295701 GNB5O14775 395 aa8.9□□□□□ -0.98
CNOT9-202ENST00000295701 LIN7AO14910 233 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms