RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TYRP1P17643 537 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 C5AR1P21730 350 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 CTSKP43235 329 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 PITX1P78337 314 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 NTHL1P78549 312 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC29A4Q7RTT9 530 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC30A8Q8IWU4 369 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZDHHC12Q96GR4 267 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 OSBPL11Q9BXB4 747 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 U3KQV3 271 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 KLHL33A6NCF5 533 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRIM43BA6NCK2 446 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ADAMDEC1O15204 470 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 KRT77Q7Z794 578 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIGXQ8TBF5 258 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC5A11Q8WWX8 675 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM3CQ92520 227 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TBL1XR1Q9BZK7 514 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 NUAK2Q9H093 628 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZDHHC18Q9NUE0 388 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TOR4AQ9NXH8 423 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM234BA2RU67 622 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 TULP3O75386 442 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 KRT36O76013 467 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 KCNJ2P63252 427 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 BTN3A2P78410 334 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM214AQ32MH5 1076 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 PRRT3Q5FWE3 981 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 FIBINQ8TAL6 211 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 TLCD1Q96CP7 247 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 OLFM1Q99784 485 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPRTNQ9H040 489 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 ETV3P41162 512 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 CST6Q15828 149 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 PTCHD3Q3KNS1 767 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 B3GNT9Q6UX72 402 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZCCHC7Q8N3Z6 543 aaKnown RBP17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 KCT2Q8NC54 265 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SCAMP4Q969E2 229 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 MIEF2Q96C03 454 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 CRISPLD1Q9H336 500 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SIX3O95343 332 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 KCNC3Q14003 757 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 NIPAL1Q6NVV3 410 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC17A6Q9P2U8 582 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 TEX264Q9Y6I9 313 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 LOC100506127A0A0U1RQW1 187 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 H3BQ06 376 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 VEGFDO43915 354 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SEPHS1P49903 392 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 DLG1Q12959 904 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 CCINQ13939 588 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC8B1Q6J4K2 584 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 HRASLS2Q9NWW9 162 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 PCDHGA2Q9Y5H1 932 aa17.29■□□□□ 0.36
CDC42EP3-201ENST00000295324 C9JVG2 144 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 CDC7O00311 574 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 GRK6P43250 576 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 IDH3AP50213 366 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 WDTC1Q8N5D0 677 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 GSTCDQ8NEC7 633 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 C2orf71A6NGG8 1288 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 TTC34A8MYJ7 566 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 FOXO6A8MYZ6 492 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 MTX3Q5HYI7 312 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 TOR1AIP1Q5JTV8 583 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 C1orf220Q5T0J3 134 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRIM74Q86UV6 250 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIH1D2Q8WWB5 315 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 PDP1Q9P0J1 537 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ADAMTS4O75173 837 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 RAPSNQ13702 412 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 PON2Q15165 354 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 NDUFAF6Q330K2 333 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARMC3Q5W041 872 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF57Q68EA5 555 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 CDK15Q96Q40 435 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 UBAP1Q9NZ09 502 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 DAPK2Q9UIK4 370 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPATA2Q9UM82 520 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 C15orf41Q9Y2V0 281 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 RIIAD1A6NNX1 92 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 A8MUA0 341 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIK3CBP42338 1070 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms