RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ADGRE2Q9UHX3 823 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ST14Q9Y5Y6 855 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 SCN10AQ9Y5Y9 1956 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 SMAD6O43541 496 aaKnown RBP12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 MTX2O75431 263 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 CKBP12277 381 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 RAB15P59190 212 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ARF5P84085 180 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ITGADQ13349 1161 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 TYSND1Q2T9J0 566 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 PARP15Q460N3 678 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 PERM1Q5SV97 790 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 PATL1Q86TB9 770 aaKnown RBP12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 OR6C4Q8NGE1 309 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 FNDC8Q8TC99 324 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 HM13Q8TCT9 377 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 SLC47A1Q96FL8 570 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 GLT1D1Q96MS3 346 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF583Q96ND8 569 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 TSSK3Q96PN8 268 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 TRIM62Q9BVG3 475 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
KCNIP3-201ENST00000295225 DRGXA6NNA5 263 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 COCHO43405 550 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 EEDO75530 441 aaKnown RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 OAZ2O95190 189 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 LPOP22079 712 aaPredicted RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ACVR1Q04771 509 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 BNIP2Q12982 314 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SLC14A1Q13336 389 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ARHGEF7Q14155 803 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 WSCD2Q2TBF2 565 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 XKR7Q5GH72 579 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 PTRHD1Q6GMV3 140 aaKnown RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SUSD1Q6UWL2 747 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 LIX1Q8N485 282 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 DUS3LQ96G46 650 aaKnown RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 TRIM54Q9BYV2 358 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 RAD21L1Q9H4I0 556 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SLC25A37Q9NYZ2 338 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 NEUROG3Q9Y4Z2 214 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SCN4AP35499 1836 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 MYOFQ9NZM1 2061 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 POM121CA8CG34 1229 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SEC22BO75396 215 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 CLDN7O95471 211 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 CD160O95971 181 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 EPHA2P29317 976 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ATP4BP51164 291 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SUOXP51687 545 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 CARTPTQ16568 116 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 SMN1Q16637 294 aaKnown RBP12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ANKRD26P1Q6NSI1 321 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 AKAP14Q86UN6 197 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 ZFAND4Q86XD8 727 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 HID1Q8IV36 788 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 FOXJ1Q92949 421 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 LRRC3Q9BY71 257 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 HIPK3Q9H422 1215 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 PKD2L2Q9NZM6 624 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 PADI4Q9UM07 663 aa12.96□□□□□ -0.33
KCNIP3-201ENST00000295225 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.34
KCNIP3-201ENST00000295225 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 TAPBPO15533 448 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 SLC25A14O95258 325 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 ECDO95905 644 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 GLUD1P00367 558 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 RPS2P15880 293 aaKnown RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 TACR1P25103 407 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 HSD3B2P26439 372 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 FMO3P31513 532 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 VBP1P61758 197 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 EMX2Q04743 252 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 CSTF3Q12996 717 aaKnown RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 NFE2Q16621 373 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 PRR23CQ6ZRP0 262 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 FAM162AQ96A26 154 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 ACDQ96AP0 544 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 MGME1Q9BQP7 344 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 SEPT3Q9UH03 358 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 CLEC4EQ9ULY5 219 aa12.95□□□□□ -0.34
KCNIP3-201ENST00000295225 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms