RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TRIM13O60858 407 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 DCTN3O75935 186 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 SIX3O95343 332 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 VIPP01282 170 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 FGF3P11487 239 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 BGNP21810 368 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 IMPA1P29218 277 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 HNMTP50135 292 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 ATXN3P54252 364 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 MAZP56270 477 aaKnown RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 KCNJ2P63252 427 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 C6orf132Q5T0Z8 1188 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 SLC9B2Q86UD5 537 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 C17orf82Q86X59 251 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 ZNF480Q8WV37 535 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 MOCOSQ96EN8 888 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 IL17FQ96PD4 163 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 TMEM79Q9BSE2 394 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 MENTQ9BUN1 341 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 KIR3DX1Q9H7L2 352 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 TMEM9BQ9NQ34 198 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 POT1Q9NUX5 634 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 WWOXQ9NZC7 414 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 ASB1Q9Y576 335 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 NEFHP12036 1026 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 EZRP15311 586 aaKnown RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 IMPDH1P20839 514 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 EEF1DP29692 281 aaKnown RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 HSPA7P48741 367 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 NAGLUP54802 743 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 HERVK_113P63132 956 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 CHI3L2Q15782 390 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 AGTRAPQ6RW13 159 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 ZCCHC23Q6ZST2 131 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 RAB44Q7Z6P3 723 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 TCAIMQ8N3R3 496 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 ARL14Q8N4G2 192 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 LMNTD1Q8N9Z9 388 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 KYQ8NBH2 561 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 GPR156Q8NFN8 814 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 LRRC8CQ8TDW0 803 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 C10orf82Q8WW14 230 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 ATL1Q8WXF7 558 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 JPH3Q8WXH2 748 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 L3HYPDHQ96EM0 354 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 GATA5Q9BWX5 397 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 ERVK-6Q9BXR3 956 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 ATG10Q9H0Y0 220 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 LRMDAQ9H2I8 198 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 DNAAF2Q9NVR5 837 aaKnown RBP17.24■□□□□ 0.35
CCDC78-201ENST00000293889 NLGN3Q9NZ94 848 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 CEP250Q9BV73 2442 aa17.24■□□□□ 0.35
CCDC78-201ENST00000293889 C4orf47A7E2U8 309 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 CCND1P24385 295 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 GGT5P36269 586 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 GDF5P43026 501 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 PNLIPRP1P54315 467 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 GPR18Q14330 331 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 PCBP2Q15366 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC78-201ENST00000293889 UNC50Q53HI1 259 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 ZNF678Q5SXM1 525 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 STPG1Q5TH74 334 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 CCNYL1Q8N7R7 359 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 PPFIBP2Q8ND30 876 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 OR6Y1Q8NGX8 325 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 UBTD2Q8WUN7 234 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 ZFPM2Q8WW38 1151 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 SREK1Q8WXA9 508 aaKnown RBP17.23■□□□□ 0.35
CCDC78-201ENST00000293889 ZNF75CPQ92670 426 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-201ENST00000293889 CD244Q9BZW8 370 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 XKR8Q9H6D3 395 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 LNPEPQ9UIQ6 1025 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 ICKQ9UPZ9 632 aa17.23■□□□□ 0.35
CCDC78-201ENST00000293889 ARID1BQ8NFD5 2236 aaPredicted RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 TRIM38O00635 465 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 PCDHGA12O60330 932 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 HNRNPCL1O60812 293 aaKnown RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 ERGP11308 486 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 PKLRP30613 574 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 SLC6A12P48065 614 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 HHEXQ03014 270 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 ASPHQ12797 758 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 FASTKQ14296 549 aaKnown RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 CYP2A13Q16696 494 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 PTCHD3Q3KNS1 767 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 C14orf28Q4W4Y0 310 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 TLDC1Q6P9B6 456 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 RPS27LQ71UM5 84 aaKnown RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 SYTL1Q8IYJ3 562 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 OR4C6Q8NH72 309 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 PPP1R14CQ8TAE6 165 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 PYCR2Q96C36 320 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 RAB3IPQ96QF0 476 aaPredicted RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 SPATA7Q9P0W8 599 aa17.22■□□□□ 0.35
CCDC78-201ENST00000293889 TNPO3Q9Y5L0 923 aaKnown RBP17.22■□□□□ 0.35
CCDC78-201ENST00000293889 E7ENX8 843 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms