RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 NTN4Q9HB63 628 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-201ENST00000286835 GKN1Q9NS71 199 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 ARIH1Q9Y4X5 557 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-201ENST00000286835 TMEM221A6NGB7 291 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 IL6P05231 212 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 ANXA5P08758 320 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 TIGD6Q17RP2 521 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 ADPRMQ3LIE5 342 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 C14orf119Q9NWQ9 140 aa13.09□□□□□ -0.31
SCAF4-201ENST00000286835 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 FPGTO14772 594 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 SULT1C4O75897 302 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 ACRP10323 421 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 PABPC1P11940 636 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF641Q96N77 438 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 INPP5KQ9BT40 448 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 INTS6Q9UL03 887 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 B3GALT4O96024 378 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 DNTTP04053 509 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF404Q494X3 552 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 TPRG1LQ5T0D9 272 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 DSN1Q9H410 356 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 RAPGEFL1Q9UHV5 662 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 MGAT4DA6NG13 374 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 S100A1P23297 94 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 MXD1Q05195 221 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 Q6ZPB1 254 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 PHYKPLQ8IUZ5 450 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
SCAF4-201ENST00000286835 MTERF1Q99551 399 aaKnown RBP13.08□□□□□ -0.32
SCAF4-201ENST00000286835 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 EFCAB10A6NFE3 127 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ANKRD66B4E2M5 251 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 MZF1P28698 734 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 HK3P52790 923 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 VPS37AQ8NEZ2 397 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 GTPBP3Q969Y2 492 aaKnown RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 BOCQ9BWV1 1114 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 CCNB1IP1Q9NPC3 277 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 NLE1Q9NVX2 485 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 MOSPD1Q9UJG1 213 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 RPS6KA6Q9UK32 745 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 PRAMEF11O60813 436 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 CPNE6O95741 557 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ESR1P03372 595 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 MMP2P08253 660 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 GKP32189 559 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 GP2P55259 537 aaKnown RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ZXDBP98169 803 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 SPIBQ01892 262 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 IRF8Q02556 426 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ACSM2AQ08AH3 577 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 LRRC73Q5JTD7 316 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ACSM2BQ68CK6 577 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 KLHDC9Q8NEP7 349 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 RTP3Q9BQQ7 232 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 Q9Y3F1 56 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 M0R129 80 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-201ENST00000286835 PTGER3P43115 390 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 RPIAP49247 311 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 NKG7Q16617 165 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ATAD3BQ5T9A4 648 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 TMEM179BQ7Z7N9 219 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 OR8J3Q8NGG0 315 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 CD200R1Q8TD46 325 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 TTPALQ9BTX7 342 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 ADPRHL2Q9NX46 363 aa13.07□□□□□ -0.32
SCAF4-201ENST00000286835 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CLIC1O00299 241 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 E2F3O00716 465 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CACNG3O60359 315 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ENGP17813 658 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 GRK3P35626 688 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CTSKP43235 329 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 DLEU7Q6UYE1 221 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 UROC1Q96N76 676 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 SMAD5Q99717 465 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms