RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CXCR6O00574 342 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 NARSO43776 548 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 PDGFBP01127 241 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TCF3P15923 654 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 EPB42P16452 691 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 GJA1P17302 382 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FSHRP23945 695 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 MAP4P27816 1152 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ELK4P28324 431 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HOXA9P31269 272 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CSNK1DP48730 415 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FAM174BQ3ZCQ3 159 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 C6orf141Q5SZD1 244 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 LRIF1Q5T3J3 769 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ANKRD26P1Q6NSI1 321 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 LINC00299Q6ZSB3 139 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ZNF554Q86TJ5 538 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 MICU2Q8IYU8 434 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 EID3Q8N140 333 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ZBTB2Q8N680 514 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 EDAQ92838 391 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TRMT2BQ96GJ1 504 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 BCL7BQ9BQE9 202 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 KAT8Q9H7Z6 458 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ZFYVE1Q9HBF4 777 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 C1orf109Q9NX04 203 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ELOVL2Q9NXB9 296 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 WWOXQ9NZC7 414 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 INVSQ9Y283 1065 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 MAN2B2Q9Y2E5 1009 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 YIPF1Q9Y548 306 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 OR51B4Q9Y5P0 310 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 NPIPB8E9PQR5 432 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 GAPDHSO14556 408 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 SLC16A6O15403 523 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 KRT6AP02538 564 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 KRT6BP04259 564 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 RHOP08100 348 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ACPPP15309 386 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 CEBPBP17676 345 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ACRV1P26436 265 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 SHMT2P34897 504 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 RYKP34925 604 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 SOX11P35716 441 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 POLR2IP36954 125 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 KRT6CP48668 564 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 PTGR1Q14914 329 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ZIK1Q3SY52 487 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 TPGS2Q68CL5 300 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 GTF2IRD2BQ6EKJ0 949 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 MSANTD1Q6ZTZ1 278 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 R3HCC1LQ7Z5L2 792 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 GTF2IRD2Q86UP8 949 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 CALHM3Q86XJ0 350 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ZCCHC7Q8N3Z6 543 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 DCAF4L2Q8NA75 395 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 DDHD1Q8NEL9 900 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 FGF13Q92913 245 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 FAM162AQ96A26 154 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 EGFL8Q99944 293 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 CORO1BQ9BR76 489 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 KCNH6Q9H252 994 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ASB8Q9H765 288 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 FANCEQ9HB96 536 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 PDE10AQ9Y233 779 aa12.59□□□□□ -0.39
C9orf3-201ENST00000277198 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
C9orf3-201ENST00000277198 H0Y626 953 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 MANBAO00462 879 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GNGT2O14610 69 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GPR37L1O60883 481 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SOCS5O75159 536 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 XYLBO75191 536 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 BCL10O95999 233 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 LRG1P02750 347 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PRPS2P11908 318 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 LAMP2P13473 410 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 MATN1P21941 496 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PRPH2P23942 346 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 YAP1P46937 504 aaKnown RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 RAD23AP54725 363 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 CLDN8P56748 225 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 C21orf59P57076 290 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SPIDRQ14159 915 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms