RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CDRT15Q96T59 188 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 RNPEPL1Q9HAU8 725 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 POMPQ9Y244 141 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 GPR89AB7ZAQ6 455 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 GPR89BP0CG08 455 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 CHRNB1P11230 501 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 NPPBP16860 134 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 RPL38P63173 70 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 PLOD1Q02809 727 aaPredicted RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 GRIK2Q13002 908 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 STX5Q13190 355 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 TDGQ13569 410 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 CYP20A1Q6UW02 462 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 SUSD1Q6UWL2 747 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 TRIM69Q86WT6 500 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 NEIL2Q969S2 332 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 SLC39A3Q9BRY0 314 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 E7ENX8 843 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 FXYD1O00168 92 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 RGS14O43566 566 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 ERGP11308 486 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 IL9P15248 144 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 HALP42357 657 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 IRX1P78414 480 aaPredicted RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 TAP2Q03519 686 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 FZD5Q13467 585 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 PYCR3Q53H96 274 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 CAPRIN2Q6IMN6 1127 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 FLCNQ8NFG4 579 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 VPS33AQ96AX1 596 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 MSANTD3Q96H12 275 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 BMFQ96LC9 184 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 GPATCH1Q9BRR8 931 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 CAAP1Q9H8G2 361 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 USP36Q9P275 1121 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 UGDHO60701 494 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ACP5P13686 325 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PRPH2P23942 346 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 VARSP26640 1264 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 RPL10P27635 214 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 CCR3P51677 355 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PSME3P61289 254 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 GAS6Q14393 721 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 MLF2Q15773 248 aaPredicted RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 LIPJQ5W064 366 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SLCO4C1Q6ZQN7 724 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 CHST15Q7LFX5 561 aaPredicted RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 ZFAND4Q86XD8 727 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 CCDC124Q96CT7 223 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 PPP3R2Q96LZ3 170 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PFDN4Q9NQP4 134 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SLC22A3O75751 556 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PSMG1O95456 288 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SLC2A4P14672 509 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ART3Q13508 389 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 TLR1Q15399 786 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SMU1Q2TAY7 513 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 TRMT5Q32P41 509 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 LEXMQ3ZCV2 418 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 XKR6Q5GH73 641 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 LAYNQ6UX15 382 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SELENOMQ8WWX9 145 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 TFGQ92734 400 aaPredicted RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 HLA-CQ95604 372 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 LRTM1Q9HBL6 345 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ASIC5Q9NY37 505 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 GMPR2Q9P2T1 348 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 NCKAP1Q9Y2A7 1128 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 NPIPB8E9PQR5 432 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SCAMP1O15126 338 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 CFLARO15519 480 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 KRT6AP02538 564 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 KRT6BP04259 564 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ACADMP11310 421 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 EZRP15311 586 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 XRCC1P18887 633 aaPredicted RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 CCND1P24385 295 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 KRT6CP48668 564 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PNLIPRP1P54315 467 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 USP39Q53GS9 565 aaKnown RBP11.74□□□□□ -0.53
SDE2-201ENST00000272091 CATSPEREQ5SY80 951 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 C1orf146Q5VVC0 180 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 GRHL2Q6ISB3 625 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 RNF148Q8N7C7 305 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 OR5K2Q8NHB8 316 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms