RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 CPOXP36551 454 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 HLCSP50747 726 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 AIF1P55008 147 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 C1QTNF8P60827 252 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.51
ERBB2-201ENST00000269571 LCN1P1Q5VSP4 162 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 ANKRD26P1Q6NSI1 321 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 TAPT1Q6NXT6 567 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 USP30Q70CQ3 517 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.51
ERBB2-201ENST00000269571 BCO2Q9BYV7 579 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 HAPLN2Q9GZV7 340 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 RNF39Q9H2S5 420 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 ATP13A3Q9H7F0 1226 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 TMEM138Q9NPI0 162 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 C1orf109Q9NX04 203 aa11.83□□□□□ -0.51
ERBB2-201ENST00000269571 NUP98P52948 1817 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MYH1P12882 1939 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MYH4Q9Y623 1939 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ACOX3O15254 700 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CYP3A5P20815 502 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 RPS3P23396 243 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■□□□ 12.1
ERBB2-201ENST00000269571 BUD31P41223 144 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 SNRPD1P62314 119 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CCL14Q16627 93 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 AGAP7PQ5VUJ5 663 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CXorf57Q6NSI4 855 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CUEDC1Q9NWM3 386 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 EMCNQ9ULC0 261 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 RAI2Q9Y5P3 530 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MAGED1Q9Y5V3 778 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 A0A1B0GTW7 788 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 G3V2L1 256 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 J3KR12 359 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 NME4O00746 187 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 TBX18O95935 607 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 PGRP06401 933 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 RPS14P62263 151 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 SLC9A5Q14940 896 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CRTC2Q53ET0 693 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ZNF767PQ75MW2 155 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 FRMD6Q96NE9 622 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MTERF1Q99551 399 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 DHRS4Q9BTZ2 278 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 HSFX1Q9UBD0 423 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ZNF451Q9Y4E5 1061 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 TBC1D3BA6NDS4 549 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 PLOD2O00469 737 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ERAL1O75616 437 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 C1RP00736 705 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ZBTB48P10074 688 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 HSD17B12Q53GQ0 312 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 AP3S1Q92572 193 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MAGEB10Q96LZ2 347 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CCDC3Q9BQI4 270 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 C1QTNF1Q9BXJ1 281 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 MMP27Q9H306 513 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 TRIT1Q9H3H1 467 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 AASSQ9UDR5 926 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 CNOT11Q9UKZ1 510 aaKnown RBP11.83□□□□□ -0.52
ERBB2-201ENST00000269571 ANGPT4Q9Y264 503 aa11.83□□□□□ -0.52
ERBB2-201ENST00000269571 PER2O15055 1255 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 DFNA5O60443 496 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 MT-ND2P03891 347 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 SMIM18P0DKX4 95 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 RPIAP49247 311 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 SWI5Q1ZZU3 235 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 ASB18Q6ZVZ8 466 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 KIF18BQ86Y91 864 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 CADM3Q8N126 398 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 KDM1BQ8NB78 822 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 LGALS12Q96DT0 336 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 RACGAP1Q9H0H5 632 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 ANKHQ9HCJ1 492 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 RIMS3Q9UJD0 308 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 DERAQ9Y315 318 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 PCDHGA7Q9Y5G6 932 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 PTTG1O95997 202 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 ASGR1P07306 291 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 RFC2P35250 354 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 ZNF45Q02386 682 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 PTGR1Q14914 329 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 TSTQ16762 297 aaKnown RBP11.82□□□□□ -0.52
ERBB2-201ENST00000269571 TRIM40Q6P9F5 258 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 ZUFSPQ96AP4 578 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 FNDC11Q9BVV2 318 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 RHBGQ9H310 441 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 PRAMEF33A0A0G2JMD5 474 aa11.82□□□□□ -0.52
ERBB2-201ENST00000269571 GSAPA4D1B5 854 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms